Analysis of Ligand-Protein Contacts in PDB entry:
8Q0Q


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 51 ligands in PDB entry 8Q0Q. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
b
1 8N-ACETYLALANINE
lig 10
AME
d
1 11N-ACETYLMETHIONINE
lig 11
SAC
i
1 9N-ACETYL-SERINE
lig 12
SAC
m
1 9N-ACETYL-SERINE
lig 13
AME
q
1 11N-ACETYLMETHIONINE
lig 14
AYA
r
1 8N-ACETYLALANINE
lig 15
3PE
A
201 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 16
PC1
A
202 501,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 17
PC1
B
201 511,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 18
SF4
B
202 8IRON/SULFUR CLUSTER
lig 19
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 20
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 21
SF4
F
502 8IRON/SULFUR CLUSTER
lig 22
SF4
G
801 8IRON/SULFUR CLUSTER
lig 23
SF4
G
802 8IRON/SULFUR CLUSTER
lig 24
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 25
K
G
804 1POTASSIUM ION
lig 26
PC1
H
401 431,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 27
3PE
I
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 28
SF4
I
202 8IRON/SULFUR CLUSTER
lig 29
SF4
I
203 8IRON/SULFUR CLUSTER
lig 30
3PE
I
204 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 31
3PE
J
201 391,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 32
3PE
M
501 381,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 33
3PE
M
502 391,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 34
CDL
N
401 73CARDIOLIPIN
lig 35
3PE
O
401 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 36
DGT
O
402 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 37
MG
O
403 1MAGNESIUM ION
lig 38
NDP
P
501 48 PHOSPHATE
lig 39
ZN
R
201 1ZINC ION
lig 40
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 41
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 42
CDL
X
201 79CARDIOLIPIN
lig 43
3PE
Z
201 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 44
3PE
d
201 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 45
PC1
d
202 331,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 46
CDL
d
203 65CARDIOLIPIN
lig 47
3PE
h
201 321,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 48
CHD
i
201 29CHOLIC ACID
lig 49
MYR
o
201 15MYRISTIC ACID
lig 50
PC1
q
701 371,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 51
CDL
q
702 60CARDIOLIPIN