Analysis of Ligand-Protein Contacts in PDB entry:
8Q2E


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 43 ligands in PDB entry 8Q2E. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CXM
A
1 11N-CARBOXYMETHIONINE
lig 2
KCX
C
220 12LYSINE NZ-CARBOXYLIC ACID
lig 3
EDO
A
201 41,2-ETHANEDIOL
lig 4
EDO
A
202 41,2-ETHANEDIOL
lig 5
EDO
A
203 41,2-ETHANEDIOL
lig 6
EDO
A
204 41,2-ETHANEDIOL
lig 7
EDO
A
205 41,2-ETHANEDIOL
lig 8
EDO
A
206 41,2-ETHANEDIOL
lig 9
SO4
A
207 5SULFATE ION
lig 10
SO4
A
208 5SULFATE ION
lig 11
SO4
A
209 5SULFATE ION
lig 12
SO4
A
210 5SULFATE ION
lig 13
EDO
B
201 41,2-ETHANEDIOL
lig 14
EDO
B
202 41,2-ETHANEDIOL
lig 15
EDO
B
203 41,2-ETHANEDIOL
lig 16
SO4
B
204 5SULFATE ION
lig 17
SO4
B
205 5SULFATE ION
lig 18
SO4
B
206 5SULFATE ION
lig 19
SO4
B
207 5SULFATE ION
lig 20
SO4
B
208 5SULFATE ION
lig 21
EDO
C
2301 41,2-ETHANEDIOL
lig 22
EDO
C
2302 41,2-ETHANEDIOL
lig 23
EDO
C
2303 41,2-ETHANEDIOL
lig 24
EDO
C
2304 41,2-ETHANEDIOL
lig 25
EDO
C
2305 41,2-ETHANEDIOL
lig 26
EDO
C
2306 41,2-ETHANEDIOL
lig 27
EDO
C
2307 41,2-ETHANEDIOL
lig 28
EDO
C
2308 41,2-ETHANEDIOL
lig 29
EDO
C
2309 41,2-ETHANEDIOL
lig 30
EDO
C
2310 41,2-ETHANEDIOL
lig 31
EDO
C
2311 41,2-ETHANEDIOL
lig 32
EDO
C
2312 41,2-ETHANEDIOL
lig 33
IS9
C
2313 6DIMETHYLCARBAMODITHIOIC ACID
lig 34
NI
C
2314 1NICKEL (II) ION
lig 35
NI
C
2315 1NICKEL (II) ION
lig 36
OH
C
2316 1HYDROXIDE ION
lig 37
SO4
C
2317 5SULFATE ION
lig 38
SO4
C
2318 5SULFATE ION
lig 39
SO4
C
2319 5SULFATE ION
lig 40
SO4
C
2320 5SULFATE ION
lig 41
SO4
C
2321 5SULFATE ION
lig 42
SO4
C
2322 5SULFATE ION
lig 43
SO4
C
2323 5SULFATE ION