Analysis of Ligand-Protein Contacts in PDB entry:
8Q47


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 89 ligands in PDB entry 8Q47. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
Y
1 8N-ACETYLALANINE
lig 10
AYA
b
1 8N-ACETYLALANINE
lig 11
AME
d
1 11N-ACETYLMETHIONINE
lig 12
SAC
i
1 9N-ACETYL-SERINE
lig 13
SAC
m
1 9N-ACETYL-SERINE
lig 14
AME
q
1 11N-ACETYLMETHIONINE
lig 15
AYA
r
1 8N-ACETYLALANINE
lig 16
PC1
A
201 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 17
3PE
A
202 341,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 18
3PE
A
203 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 19
SF4
B
201 8IRON/SULFUR CLUSTER
lig 20
PC1
B
202 461,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 21
PLC
B
203 38DIUNDECYL PHOSPHATIDYL CHOLINE
lig 22
PC1
B
204 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 23
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 24
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 25
SF4
F
502 8IRON/SULFUR CLUSTER
lig 26
SF4
G
801 8IRON/SULFUR CLUSTER
lig 27
SF4
G
802 8IRON/SULFUR CLUSTER
lig 28
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 29
K
G
804 1POTASSIUM ION
lig 30
U10
H
401 28UBIQUINONE-10
lig 31
PC1
H
402 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 32
PC1
H
403 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 33
SF4
I
201 8IRON/SULFUR CLUSTER
lig 34
SF4
I
202 8IRON/SULFUR CLUSTER
lig 35
PC1
I
203 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 36
PC1
I
204 371,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 37
3PE
I
205 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 38
CDL
J
201 36CARDIOLIPIN
lig 39
PC1
J
202 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 40
3PE
J
203 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 41
3PE
J
204 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 42
CDL
L
701 87CARDIOLIPIN
lig 43
3PE
L
702 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 44
3PE
L
703 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 45
3PE
L
704 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 46
PLC
L
705 27DIUNDECYL PHOSPHATIDYL CHOLINE
lig 47
3PE
L
706 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 48
PC1
L
707 471,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 49
ZN
M
601 1ZINC ION
lig 50
CDL
M
602 91CARDIOLIPIN
lig 51
PC1
M
603 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 52
3PE
M
604 501,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 53
PC1
M
605 261,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 54
CDL
N
401 74CARDIOLIPIN
lig 55
3PE
N
402 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 56
3PE
N
403 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 57
DGT
O
401 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 58
MG
O
402 1MAGNESIUM ION
lig 59
PLC
O
403 26DIUNDECYL PHOSPHATIDYL CHOLINE
lig 60
NDP
P
501 48 PHOSPHATE
lig 61
ZN
R
201 1ZINC ION
lig 62
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 63
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 64
CDL
X
201 87CARDIOLIPIN
lig 65
3PE
Y
201 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 66
3PE
Y
202 271,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 67
3PE
Y
203 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 68
3PE
Y
204 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 69
3PE
Y
205 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 70
3PE
Z
201 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 71
3PE
b
101 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 72
PLC
b
102 32DIUNDECYL PHOSPHATIDYL CHOLINE
lig 73
CDL
d
201 65CARDIOLIPIN
lig 74
3PE
d
202 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 75
PC1
d
203 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 76
3PE
f
101 291,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 77
3PE
f
102 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 78
PLC
g
201 32DIUNDECYL PHOSPHATIDYL CHOLINE
lig 79
CDL
h
201 80CARDIOLIPIN
lig 80
PC1
h
202 311,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 81
CHD
i
201 29CHOLIC ACID
lig 82
3PE
j
101 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 83
3PE
m
201 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 84
3PE
m
202 331,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 85
PC1
m
203 401,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 86
MYR
o
201 15MYRISTIC ACID
lig 87
3PE
o
202 351,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 88
CDL
q
201 61CARDIOLIPIN
lig 89
PC1
q
202 301,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE