Analysis of Ligand-Protein Contacts in PDB entry:
8Q49


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 96 ligands in PDB entry 8Q49. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
Y
1 8N-ACETYLALANINE
lig 10
AYA
b
1 8N-ACETYLALANINE
lig 11
AME
d
1 11N-ACETYLMETHIONINE
lig 12
SAC
i
1 9N-ACETYL-SERINE
lig 13
SAC
m
1 9N-ACETYL-SERINE
lig 14
AME
q
1 11N-ACETYLMETHIONINE
lig 15
AYA
r
1 8N-ACETYLALANINE
lig 16
PC1
A
201 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 17
3PE
A
202 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 18
3PE
A
203 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 19
PC1
A
204 411,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 20
SF4
B
201 8IRON/SULFUR CLUSTER
lig 21
PLC
B
202 28DIUNDECYL PHOSPHATIDYL CHOLINE
lig 22
PC1
B
203 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 23
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 24
SF4
F
501 8IRON/SULFUR CLUSTER
lig 25
FMN
F
502 31FLAVIN MONONUCLEOTIDE
lig 26
SF4
G
801 8IRON/SULFUR CLUSTER
lig 27
SF4
G
802 8IRON/SULFUR CLUSTER
lig 28
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 29
K
G
804 1POTASSIUM ION
lig 30
3PE
H
401 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 31
PC1
H
402 481,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 32
PC1
H
403 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 33
SF4
I
201 8IRON/SULFUR CLUSTER
lig 34
SF4
I
202 8IRON/SULFUR CLUSTER
lig 35
PC1
I
203 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 36
PC1
I
204 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 37
3PE
J
201 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 38
3PE
J
202 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 39
PLC
J
203 35DIUNDECYL PHOSPHATIDYL CHOLINE
lig 40
3PE
K
101 441,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 41
PC1
L
701 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 42
CHD
L
702 29CHOLIC ACID
lig 43
PLC
L
703 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 44
3PE
L
704 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 45
3PE
L
705 341,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 46
ZN
M
601 1ZINC ION
lig 47
3PE
M
602 501,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 48
3PE
M
603 451,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 49
PC1
M
604 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 50
CDL
M
605 70CARDIOLIPIN
lig 51
CDL
M
606 100CARDIOLIPIN
lig 52
3PE
N
401 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 53
3PE
N
402 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 54
CDL
N
403 84CARDIOLIPIN
lig 55
DGT
O
401 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 56
MG
O
402 1MAGNESIUM ION
lig 57
PLC
O
403 42DIUNDECYL PHOSPHATIDYL CHOLINE
lig 58
FVH
P
501 48 PHOSPHONOOXY-OXOLAN-2-YL]METHYL HYDROGEN
lig 59
ZN
R
201 1ZINC ION
lig 60
EHZ
T
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 61
EHZ
U
101 37 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 62
CDL
X
201 86CARDIOLIPIN
lig 63
3PE
Y
201 271,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 64
3PE
Y
202 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 65
3PE
Y
203 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 66
3PE
Y
204 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 67
3PE
Y
205 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 68
3PE
Y
206 341,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 69
PLC
Y
207 37DIUNDECYL PHOSPHATIDYL CHOLINE
lig 70
3PE
Y
208 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 71
PLC
Z
201 34DIUNDECYL PHOSPHATIDYL CHOLINE
lig 72
3PE
Z
202 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 73
3PE
Z
203 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 74
3PE
b
101 471,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 75
3PE
b
102 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 76
PLC
b
103 38DIUNDECYL PHOSPHATIDYL CHOLINE
lig 77
3PE
b
104 371,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 78
3PE
d
201 491,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 79
PC1
d
202 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 80
PLC
d
203 32DIUNDECYL PHOSPHATIDYL CHOLINE
lig 81
CDL
d
204 65CARDIOLIPIN
lig 82
3PE
f
101 301,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 83
3PE
f
102 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 84
3PE
f
103 321,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 85
PC1
g
201 441,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 86
PLC
h
201 28DIUNDECYL PHOSPHATIDYL CHOLINE
lig 87
PC1
h
202 401,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 88
CDL
i
201 72CARDIOLIPIN
lig 89
3PE
m
201 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 90
3PE
m
202 301,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 91
PC1
m
203 401,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 92
MYR
o
201 15MYRISTIC ACID
lig 93
PC1
q
201 231,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 94
3PE
q
202 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 95
3PE
r
201 281,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 96
CDL
r
202 58CARDIOLIPIN