Analysis of Ligand-Protein Contacts in PDB entry:
8QEG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 8QEG. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GDP
A
401 28GUANOSINE-5'-DIPHOSPHATE
lig 2
EDO
A
402 41,2-ETHANEDIOL
lig 3
EDO
A
403 41,2-ETHANEDIOL
lig 4
EDO
A
404 41,2-ETHANEDIOL
lig 5
EDO
A
405 41,2-ETHANEDIOL
lig 6
EDO
A
406 41,2-ETHANEDIOL
lig 7
DAM
A
407 6N-METHYL-ALPHA-BETA-DEHYDROALANINE
lig 8
HF2
A
408 11(2R)-2-HYDROXY-3-PHENYLPROPANOIC ACID
lig 9
THC
A
409 10N-METHYLCARBONYLTHREONINE
lig 10
OTH
A
410 9N,O-DIMETHYL-L-THREONINE
lig 11
HL2
A
411 9(2S,3R)-2-AMINO-3-HYDROXY-4-METHYLPENTANOI
lig 12
HL2
A
412 9(2S,3R)-2-AMINO-3-HYDROXY-4-METHYLPENTANOI
lig 13
EDO
B
401 41,2-ETHANEDIOL
lig 14
EDO
B
402 41,2-ETHANEDIOL
lig 15
EDO
B
403 41,2-ETHANEDIOL
lig 16
MAA
B
404 6N-METHYL-L-ALANINE
lig 17
ALA
B
405 5ALANINE
lig 18
ACE
B
406 3ACETYL GROUP