Analysis of Ligand-Protein Contacts in PDB entry:
8QKB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 31 ligands in PDB entry 8QKB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
D1R
A
301 41 PHENYLALANINAMIDE
lig 2
PG4
A
302 13TETRAETHYLENE GLYCOL
lig 3
EDO
A
303 41,2-ETHANEDIOL
lig 4
EDO
A
304 41,2-ETHANEDIOL
lig 5
EDO
A
305 41,2-ETHANEDIOL
lig 6
PEG
A
306 7DI(HYDROXYETHYL)ETHER
lig 7
EDO
A
307 41,2-ETHANEDIOL
lig 8
PEG
A
308 7DI(HYDROXYETHYL)ETHER
lig 9
DMS
A
309 4DIMETHYL SULFOXIDE
lig 10
D1R
B
301 41 PHENYLALANINAMIDE
lig 11
PGE
B
302 10TRIETHYLENE GLYCOL
lig 12
EDO
B
303 41,2-ETHANEDIOL
lig 13
EDO
B
304 41,2-ETHANEDIOL
lig 14
DMS
B
305 4DIMETHYL SULFOXIDE
lig 15
EDO
B
306 41,2-ETHANEDIOL
lig 16
EDO
B
307 41,2-ETHANEDIOL
lig 17
EDO
B
308 41,2-ETHANEDIOL
lig 18
DMS
B
309 4DIMETHYL SULFOXIDE
lig 19
D1R
C
301 41 PHENYLALANINAMIDE
lig 20
PEG
C
302 7DI(HYDROXYETHYL)ETHER
lig 21
DMS
C
303 4DIMETHYL SULFOXIDE
lig 22
EDO
C
304 41,2-ETHANEDIOL
lig 23
DMS
C
305 4DIMETHYL SULFOXIDE
lig 24
PEG
D
601 7DI(HYDROXYETHYL)ETHER
lig 25
D1R
D
602 41 PHENYLALANINAMIDE
lig 26
PEG
D
603 7DI(HYDROXYETHYL)ETHER
lig 27
DMS
D
604 4DIMETHYL SULFOXIDE
lig 28
PGE
D
605 10TRIETHYLENE GLYCOL
lig 29
EDO
D
606 41,2-ETHANEDIOL
lig 30
PGE
D
607 10TRIETHYLENE GLYCOL
lig 31
EDO
D
608 41,2-ETHANEDIOL