Analysis of Ligand-Protein Contacts in PDB entry:
8QKE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 8QKE. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
C
1 3ACETYL GROUP
lig 2
2KY
C
2 9(2S)-AMINO(CYCLOPENTYL)ETHANOIC ACID
lig 3
VEF
C
5 7(3S)-3-AZANYL-2,2-BIS(OXIDANYL)BUTANOIC AC
lig 4
5XU
C
7 5(2~{S})-2-AZANYLPROPANAL
lig 5
ACE
D
1 3ACETYL GROUP
lig 6
2KY
D
2 9(2S)-AMINO(CYCLOPENTYL)ETHANOIC ACID
lig 7
VEF
D
5 7(3S)-3-AZANYL-2,2-BIS(OXIDANYL)BUTANOIC AC
lig 8
5XU
D
7 5(2~{S})-2-AZANYLPROPANAL
lig 9
CA
A
901 1CALCIUM ION
lig 10
CA
A
902 1CALCIUM ION
lig 11
CA
A
903 1CALCIUM ION
lig 12
NAG
A
904 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
SO4
A
905 5SULFATE ION
lig 14
CA
B
901 1CALCIUM ION
lig 15
CA
B
902 1CALCIUM ION
lig 16
CA
B
903 1CALCIUM ION
lig 17
SO4
B
904 5SULFATE ION