Analysis of Ligand-Protein Contacts in PDB entry:
8QM3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 32 ligands in PDB entry 8QM3. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
402
A
601 17 (OXOMETHYLIDENE)DIIRON(2+)
lig 2
SF4
A
602 8IRON/SULFUR CLUSTER
lig 3
SF4
A
603 8IRON/SULFUR CLUSTER
lig 4
SF4
A
604 8IRON/SULFUR CLUSTER
lig 5
SF4
A
605 8IRON/SULFUR CLUSTER
lig 6
FES
A
606 4FE2/S2 (INORGANIC) CLUSTER
lig 7
GOL
A
608 6GLYCEROL
lig 8
FOR
A
609 1FORMYL GROUP
lig 9
GOL
A
610 6GLYCEROL
lig 10
FOR
A
611 2FORMYL GROUP
lig 11
FOR
A
612 2FORMYL GROUP
lig 12
MG
A
615 1MAGNESIUM ION
lig 13
MG
A
616 1MAGNESIUM ION
lig 14
CL
A
617 1CHLORIDE ION
lig 15
CL
A
618 1CHLORIDE ION
lig 16
402
B
601 17 (OXOMETHYLIDENE)DIIRON(2+)
lig 17
SF4
B
602 8IRON/SULFUR CLUSTER
lig 18
SF4
B
603 8IRON/SULFUR CLUSTER
lig 19
SF4
B
604 8IRON/SULFUR CLUSTER
lig 20
SF4
B
605 8IRON/SULFUR CLUSTER
lig 21
FES
B
606 4FE2/S2 (INORGANIC) CLUSTER
lig 22
FOR
B
607 2FORMYL GROUP
lig 23
GOL
B
609 6GLYCEROL
lig 24
FOR
B
610 1FORMYL GROUP
lig 25
GOL
B
611 6GLYCEROL
lig 26
FOR
B
612 2FORMYL GROUP
lig 27
MG
B
615 1MAGNESIUM ION
lig 28
MG
B
616 1MAGNESIUM ION
lig 29
MG
B
617 1MAGNESIUM ION
lig 30
CL
B
618 1CHLORIDE ION
lig 31
CL
B
619 1CHLORIDE ION
lig 32
CL
B
620 1CHLORIDE ION