Analysis of Ligand-Protein Contacts in PDB entry:
8QRN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 94 ligands in PDB entry 8QRN. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
5MU
A
1076 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 2
B8T
A
1486 214-METHYL, CYTIDINE-5'-MONOPHOSPHATE
lig 3
5MC
A
1488 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 4
MA6
A
1583 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 5
MA6
A
1584 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 6
AYA
Q
2 8N-ACETYLALANINE
lig 7
AYA
2
2 8N-ACETYLALANINE
lig 8
RSQ
5
34 225-FORMYLCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
lig 9
NAD
A
1701 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 10
SPM
A
1702 14SPERMINE
lig 11
SRY
A
1703 40STREPTOMYCIN
lig 12
MG
A
1704 1MAGNESIUM ION
lig 13
MG
A
1705 1MAGNESIUM ION
lig 14
MG
A
1706 1MAGNESIUM ION
lig 15
MG
A
1707 1MAGNESIUM ION
lig 16
MG
A
1708 1MAGNESIUM ION
lig 17
MG
A
1709 1MAGNESIUM ION
lig 18
MG
A
1710 1MAGNESIUM ION
lig 19
MG
A
1711 1MAGNESIUM ION
lig 20
MG
A
1712 1MAGNESIUM ION
lig 21
MG
A
1713 1MAGNESIUM ION
lig 22
MG
A
1714 1MAGNESIUM ION
lig 23
MG
A
1715 1MAGNESIUM ION
lig 24
MG
A
1716 1MAGNESIUM ION
lig 25
MG
A
1717 1MAGNESIUM ION
lig 26
MG
A
1718 1MAGNESIUM ION
lig 27
MG
A
1719 1MAGNESIUM ION
lig 28
MG
A
1720 1MAGNESIUM ION
lig 29
MG
A
1721 1MAGNESIUM ION
lig 30
MG
A
1722 1MAGNESIUM ION
lig 31
MG
A
1723 1MAGNESIUM ION
lig 32
MG
A
1724 1MAGNESIUM ION
lig 33
MG
A
1725 1MAGNESIUM ION
lig 34
MG
A
1726 1MAGNESIUM ION
lig 35
MG
A
1727 1MAGNESIUM ION
lig 36
MG
A
1728 1MAGNESIUM ION
lig 37
MG
A
1729 1MAGNESIUM ION
lig 38
MG
A
1730 1MAGNESIUM ION
lig 39
MG
A
1731 1MAGNESIUM ION
lig 40
MG
A
1732 1MAGNESIUM ION
lig 41
MG
A
1733 1MAGNESIUM ION
lig 42
MG
A
1734 1MAGNESIUM ION
lig 43
MG
A
1735 1MAGNESIUM ION
lig 44
MG
A
1736 1MAGNESIUM ION
lig 45
MG
A
1737 1MAGNESIUM ION
lig 46
MG
A
1738 1MAGNESIUM ION
lig 47
MG
A
1739 1MAGNESIUM ION
lig 48
MG
A
1740 1MAGNESIUM ION
lig 49
MG
A
1741 1MAGNESIUM ION
lig 50
MG
A
1742 1MAGNESIUM ION
lig 51
MG
A
1743 1MAGNESIUM ION
lig 52
MG
A
1744 1MAGNESIUM ION
lig 53
MG
A
1745 1MAGNESIUM ION
lig 54
MG
A
1746 1MAGNESIUM ION
lig 55
MG
A
1747 1MAGNESIUM ION
lig 56
MG
A
1748 1MAGNESIUM ION
lig 57
MG
A
1749 1MAGNESIUM ION
lig 58
MG
A
1750 1MAGNESIUM ION
lig 59
MG
A
1751 1MAGNESIUM ION
lig 60
MG
A
1752 1MAGNESIUM ION
lig 61
MG
A
1753 1MAGNESIUM ION
lig 62
MG
A
1754 1MAGNESIUM ION
lig 63
MG
A
1755 1MAGNESIUM ION
lig 64
MG
A
1756 1MAGNESIUM ION
lig 65
MG
A
1757 1MAGNESIUM ION
lig 66
K
A
1758 1POTASSIUM ION
lig 67
K
A
1759 1POTASSIUM ION
lig 68
K
A
1760 1POTASSIUM ION
lig 69
K
A
1761 1POTASSIUM ION
lig 70
K
A
1762 1POTASSIUM ION
lig 71
K
A
1763 1POTASSIUM ION
lig 72
K
A
1764 1POTASSIUM ION
lig 73
K
A
1765 1POTASSIUM ION
lig 74
K
A
1766 1POTASSIUM ION
lig 75
K
A
1767 1POTASSIUM ION
lig 76
K
A
1768 1POTASSIUM ION
lig 77
K
A
1769 1POTASSIUM ION
lig 78
K
A
1770 1POTASSIUM ION
lig 79
K
A
1771 1POTASSIUM ION
lig 80
K
A
1772 1POTASSIUM ION
lig 81
K
A
1773 1POTASSIUM ION
lig 82
K
A
1774 1POTASSIUM ION
lig 83
MG
B
301 1MAGNESIUM ION
lig 84
ZN
O
301 1ZINC ION
lig 85
FES
P
201 4FE2/S2 (INORGANIC) CLUSTER
lig 86
FES
T
201 4FE2/S2 (INORGANIC) CLUSTER
lig 87
MG
X
401 1MAGNESIUM ION
lig 88
ATP
X
402 31ADENOSINE-5'-TRIPHOSPHATE
lig 89
GNP
X
403 32PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTE
lig 90
MG
3
201 1MAGNESIUM ION
lig 91
FME
5
101 10N-FORMYLMETHIONINE
lig 92
GTP
7
801 32GUANOSINE-5'-TRIPHOSPHATE
lig 93
MG
7
802 1MAGNESIUM ION
lig 94
K
7
803 1POTASSIUM ION