Analysis of Ligand-Protein Contacts in PDB entry:
8QSD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 12 ligands in PDB entry 8QSD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
H
365 10PHOSPHOSERINE
lig 2
SEP
S
365 10PHOSPHOSERINE
lig 3
WQT
A
301 22 DIAZASPIRO[3.5]NONAN-2-YL]ETHANONE
lig 4
MG
A
302 1MAGNESIUM ION
lig 5
MG
A
303 1MAGNESIUM ION
lig 6
MG
A
304 1MAGNESIUM ION
lig 7
CL
A
305 1CHLORIDE ION
lig 8
WQT
J
301 22 DIAZASPIRO[3.5]NONAN-2-YL]ETHANONE
lig 9
CL
J
302 1CHLORIDE ION
lig 10
MG
J
303 1MAGNESIUM ION
lig 11
MG
J
304 1MAGNESIUM ION
lig 12
MG
J
305 1MAGNESIUM ION