Analysis of Ligand-Protein Contacts in PDB entry:
8QYD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 8QYD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CDL
A
801 100CARDIOLIPIN
lig 2
CA
A
802 1CALCIUM ION
lig 3
PEE
B
801 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 4
CDL
B
802 100CARDIOLIPIN
lig 5
PEE
B
803 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 6
CA
B
804 1CALCIUM ION
lig 7
CDL
C
801 100CARDIOLIPIN
lig 8
PEE
C
802 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 9
CA
C
803 1CALCIUM ION
lig 10
CDL
D
801 100CARDIOLIPIN
lig 11
PEE
D
802 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 12
PLM
D
803 18PALMITIC ACID
lig 13
CA
D
804 1CALCIUM ION
lig 14
CDL
E
801 100CARDIOLIPIN
lig 15
PEE
E
802 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 16
CA
E
803 1CALCIUM ION