Analysis of Ligand-Protein Contacts in PDB entry:
8R0M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 8R0M. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
LMT
A
401 33DODECYL-BETA-D-MALTOSIDE
lig 2
LFA
A
402 11EICOSANE
lig 3
LFA
A
403 17EICOSANE
lig 4
LFA
A
404 15EICOSANE
lig 5
LFA
A
405 8EICOSANE
lig 6
RET
A
406 20RETINAL
lig 7
LMT
B
401 33DODECYL-BETA-D-MALTOSIDE
lig 8
LFA
B
402 16EICOSANE
lig 9
LFA
B
403 14EICOSANE
lig 10
LFA
B
404 8EICOSANE
lig 11
LFA
B
405 8EICOSANE
lig 12
RET
B
406 20RETINAL
lig 13
LMT
C
401 33DODECYL-BETA-D-MALTOSIDE
lig 14
LFA
C
402 15EICOSANE
lig 15
LFA
C
403 9EICOSANE
lig 16
LFA
C
404 15EICOSANE
lig 17
LFA
C
405 6EICOSANE
lig 18
RET
C
406 20RETINAL
lig 19
LMT
D
401 33DODECYL-BETA-D-MALTOSIDE
lig 20
LFA
D
402 12EICOSANE
lig 21
LFA
D
403 8EICOSANE
lig 22
LFA
D
404 16EICOSANE
lig 23
LFA
D
405 8EICOSANE
lig 24
RET
D
406 20RETINAL
lig 25
LMT
E
401 33DODECYL-BETA-D-MALTOSIDE
lig 26
LFA
E
402 13EICOSANE
lig 27
LFA
E
403 7EICOSANE
lig 28
LFA
E
404 16EICOSANE
lig 29
RET
E
405 20RETINAL