Analysis of Ligand-Protein Contacts in PDB entry:
8R41


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 8R41. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
XUF
A
401 25 (1,3-THIAZOL-2-YL)PIPERIDIN-4-AMINE
lig 6
EDO
A
402 41,2-ETHANEDIOL
lig 7
EDO
A
403 41,2-ETHANEDIOL
lig 8
EDO
A
404 41,2-ETHANEDIOL
lig 9
EDO
A
405 41,2-ETHANEDIOL
lig 10
BR
A
406 1BROMIDE ION
lig 11
BR
A
407 1BROMIDE ION
lig 12
XUF
B
401 25 (1,3-THIAZOL-2-YL)PIPERIDIN-4-AMINE
lig 13
EDO
B
402 41,2-ETHANEDIOL
lig 14
EDO
B
403 41,2-ETHANEDIOL
lig 15
EDO
B
404 41,2-ETHANEDIOL
lig 16
EDO
B
405 41,2-ETHANEDIOL
lig 17
EDO
B
406 41,2-ETHANEDIOL