Analysis of Ligand-Protein Contacts in PDB entry:
8R57


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 57 ligands in PDB entry 8R57. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PSU
A
1180 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 2
PSU
A
1192 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 3
PSU
A
1219 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 4
OMC
A
1220 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 5
OMU
A
1236 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 6
OMU
A
1265 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 7
OMU
A
1267 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 8
OMU
A
1274 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 9
OMG
A
1276 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 10
4AC
A
1285 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 11
PSU
A
1315 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 12
A2M
A
1331 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 13
OMC
A
1337 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 14
OMC
A
1371 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 15
PSU
A
1372 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 16
OMU
A
1385 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 17
PSU
A
1407 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 18
OMG
A
1435 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 19
PSU
A
1441 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 20
OMU
A
1449 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 21
PSU
A
1480 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 22
PSU
A
1536 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 23
PSU
A
1538 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 24
PSU
A
1570 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 25
A2M
A
1582 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 26
7MG
A
1584 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 27
PSU
A
1607 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 28
PSU
A
1612 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 29
PSU
A
1618 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 30
MG
P
301 1MAGNESIUM ION
lig 31
ZN
d
101 1ZINC ION
lig 32
K
d
102 1POTASSIUM ION
lig 33
K
A
1901 1POTASSIUM ION
lig 34
K
A
1902 1POTASSIUM ION
lig 35
K
A
1903 1POTASSIUM ION
lig 36
K
A
1904 1POTASSIUM ION
lig 37
K
A
1905 1POTASSIUM ION
lig 38
MG
A
1906 1MAGNESIUM ION
lig 39
MG
A
1907 1MAGNESIUM ION
lig 40
MG
A
1908 1MAGNESIUM ION
lig 41
MG
A
1909 1MAGNESIUM ION
lig 42
MG
A
1910 1MAGNESIUM ION
lig 43
MG
A
1911 1MAGNESIUM ION
lig 44
MG
A
1912 1MAGNESIUM ION
lig 45
MG
A
1913 1MAGNESIUM ION
lig 46
MG
A
1914 1MAGNESIUM ION
lig 47
MG
A
1915 1MAGNESIUM ION
lig 48
MG
A
1916 1MAGNESIUM ION
lig 49
MG
A
1917 1MAGNESIUM ION
lig 50
MG
A
1918 1MAGNESIUM ION
lig 51
MG
A
1919 1MAGNESIUM ION
lig 52
MG
A
1920 1MAGNESIUM ION
lig 53
MG
A
1921 1MAGNESIUM ION
lig 54
MG
A
1922 1MAGNESIUM ION
lig 55
MG
A
1923 1MAGNESIUM ION
lig 56
MG
A
1924 1MAGNESIUM ION
lig 57
ZN
f
100 1ZINC ION