Analysis of Ligand-Protein Contacts in PDB entry:
8RDU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 8RDU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
1
300 1MAGNESIUM ION
lig 2
ZN
C
200 1ZINC ION
lig 3
ZN
C
201 1ZINC ION
lig 4
ATP
D
300 31ADENOSINE-5'-TRIPHOSPHATE
lig 5
MG
D
301 1MAGNESIUM ION
lig 6
ATP
E
300 31ADENOSINE-5'-TRIPHOSPHATE
lig 7
MG
E
301 1MAGNESIUM ION
lig 8
ATP
F
300 31ADENOSINE-5'-TRIPHOSPHATE
lig 9
MG
F
301 1MAGNESIUM ION
lig 10
ATP
G
300 31ADENOSINE-5'-TRIPHOSPHATE
lig 11
MG
G
301 1MAGNESIUM ION
lig 12
ATP
H
300 31ADENOSINE-5'-TRIPHOSPHATE
lig 13
MG
H
301 1MAGNESIUM ION
lig 14
ATP
I
300 31ADENOSINE-5'-TRIPHOSPHATE
lig 15
MG
I
301 1MAGNESIUM ION
lig 16
ATP
J
300 31ADENOSINE-5'-TRIPHOSPHATE
lig 17
MG
J
301 1MAGNESIUM ION
lig 18
ATP
K
300 31ADENOSINE-5'-TRIPHOSPHATE
lig 19
MG
K
301 1MAGNESIUM ION
lig 20
ATP
L
300 31ADENOSINE-5'-TRIPHOSPHATE
lig 21
MG
L
301 1MAGNESIUM ION
lig 22
ATP
M
300 31ADENOSINE-5'-TRIPHOSPHATE
lig 23
MG
M
301 1MAGNESIUM ION
lig 24
MG
N
301 1MAGNESIUM ION
lig 25
ATP
N
302 31ADENOSINE-5'-TRIPHOSPHATE
lig 26
ATP
O
300 31ADENOSINE-5'-TRIPHOSPHATE
lig 27
MG
O
301 1MAGNESIUM ION
lig 28
ATP
P
300 31ADENOSINE-5'-TRIPHOSPHATE
lig 29
MG
P
301 1MAGNESIUM ION
lig 30
MG
Q
301 1MAGNESIUM ION
lig 31
ATP
Q
302 31ADENOSINE-5'-TRIPHOSPHATE
lig 32
MG
R
600 1MAGNESIUM ION
lig 33
MG
S
600 1MAGNESIUM ION