Analysis of Ligand-Protein Contacts in PDB entry:
8RFP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 8RFP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GLC
C
1 11ALPHA-D-GLUCOPYRANOSE
lig 2
FRU
C
2 12BETA-D-FRUCTOFURANOSE
lig 3
CU
A
401 1COPPER (II) ION
lig 4
CU
A
402 1COPPER (II) ION
lig 5
NO2
A
404 3NITRITE ION
lig 6
NO2
A
405 3NITRITE ION
lig 7
NO
A
406 2NITRIC OXIDE
lig 8
SO4
A
407 5SULFATE ION
lig 9
SO4
A
408 5SULFATE ION
lig 10
SO4
A
409 5SULFATE ION
lig 11
SO4
A
410 5SULFATE ION
lig 12
SO4
A
412 5SULFATE ION