Analysis of Ligand-Protein Contacts in PDB entry:
8RGR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 60 ligands in PDB entry 8RGR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 2
AYA
r
1 8N-ACETYLALANINE
lig 3
FME
A
1 10N-FORMYLMETHIONINE
lig 4
FME
H
1 10N-FORMYLMETHIONINE
lig 5
FME
J
1 10N-FORMYLMETHIONINE
lig 6
FME
K
1 10N-FORMYLMETHIONINE
lig 7
FME
L
1 10N-FORMYLMETHIONINE
lig 8
FME
M
1 10N-FORMYLMETHIONINE
lig 9
FME
N
1 10N-FORMYLMETHIONINE
lig 10
AYA
b
1 8N-ACETYLALANINE
lig 11
SAC
i
1 9N-ACETYL-SERINE
lig 12
SF4
6
201 8IRON/SULFUR CLUSTER
lig 13
3PE
6
202 321,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 14
PC1
6
203 431,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 15
UQ
D
501 63COENZYME Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-
lig 16
3PE
D
502 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 17
FES
2
301 4FE2/S2 (INORGANIC) CLUSTER
lig 18
FMN
1
501 31FLAVIN MONONUCLEOTIDE
lig 19
SF4
1
502 8IRON/SULFUR CLUSTER
lig 20
SF4
3
801 8IRON/SULFUR CLUSTER
lig 21
SF4
3
802 8IRON/SULFUR CLUSTER
lig 22
FES
3
803 4FE2/S2 (INORGANIC) CLUSTER
lig 23
K
3
804 1POTASSIUM ION
lig 24
SF4
9
201 8IRON/SULFUR CLUSTER
lig 25
SF4
9
202 8IRON/SULFUR CLUSTER
lig 26
PC1
9
203 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 27
PC1
9
204 471,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 28
NDP
P
501 48 PHOSPHATE
lig 29
ZN
7
201 1ZINC ION
lig 30
ZMP
W
201 34 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] TETRAD
lig 31
3PE
r
201 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 32
CDL
r
202 57CARDIOLIPIN
lig 33
PC1
A
601 311,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 34
3PE
A
602 431,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 35
CDL
H
401 51CARDIOLIPIN
lig 36
3PE
K
201 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 37
3PE
L
701 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 38
CDL
L
702 78CARDIOLIPIN
lig 39
CDL
L
703 46CARDIOLIPIN
lig 40
3PE
M
501 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 41
3PE
M
502 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 42
3PE
M
503 361,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 43
PC1
N
401 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 44
CDL
N
402 90CARDIOLIPIN
lig 45
3PE
N
403 381,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 46
DGT
O
401 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 47
MG
O
402 1MAGNESIUM ION
lig 48
CDL
Y
401 94CARDIOLIPIN
lig 49
3PE
Y
402 281,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 50
3PE
Y
403 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 51
CDL
Y
404 57CARDIOLIPIN
lig 52
3PE
Z
401 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 53
CDL
d
201 67CARDIOLIPIN
lig 54
3PE
d
202 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 55
3PE
d
203 321,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 56
CDL
h
201 70CARDIOLIPIN
lig 57
3PE
i
201 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 58
CDL
m
201 72CARDIOLIPIN
lig 59
3PE
m
202 301,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 60
ZMP
n
201 32 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] TETRAD