Analysis of Ligand-Protein Contacts in PDB entry:
8RNL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 8RNL. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
A
303 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
DAO
A
304 14LAURIC ACID
lig 5
HEM
A
305 43PROTOPORPHYRIN IX CONTAINING FE
lig 6
PEG
A
306 7DI(HYDROXYETHYL)ETHER
lig 7
GOL
A
307 6GLYCEROL
lig 8
PEG
A
308 7DI(HYDROXYETHYL)ETHER
lig 9
GOL
A
309 6GLYCEROL
lig 10
PEG
A
310 7DI(HYDROXYETHYL)ETHER
lig 11
MG
A
311 1MAGNESIUM ION
lig 12
SO4
A
312 5SULFATE ION
lig 13
SO4
A
313 5SULFATE ION
lig 14
SO4
A
314 5SULFATE ION
lig 15
NAG
B
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
B
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
HEM
B
303 43PROTOPORPHYRIN IX CONTAINING FE
lig 18
DAO
B
304 14LAURIC ACID
lig 19
DAO
B
305 14LAURIC ACID
lig 20
GOL
B
306 6GLYCEROL
lig 21
GOL
B
307 6GLYCEROL
lig 22
GOL
B
308 6GLYCEROL
lig 23
MG
B
309 1MAGNESIUM ION
lig 24
SO4
B
310 5SULFATE ION