Analysis of Ligand-Protein Contacts in PDB entry:
8RNN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 8RNN. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
A
303 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
HEM
A
304 43PROTOPORPHYRIN IX CONTAINING FE
lig 5
PDN
A
305 2617,21-DIHYDROXYPREGNA-1,4-DIENE-3,11,20-TR
lig 6
GOL
A
306 6GLYCEROL
lig 7
GOL
A
307 6GLYCEROL
lig 8
PEG
A
308 7DI(HYDROXYETHYL)ETHER
lig 9
MG
A
309 1MAGNESIUM ION
lig 10
SO4
A
310 5SULFATE ION
lig 11
SO4
A
311 5SULFATE ION
lig 12
SO4
A
312 5SULFATE ION
lig 13
DMS
A
313 4DIMETHYL SULFOXIDE
lig 14
NAG
B
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
B
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
B
303 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
DMS
B
304 4DIMETHYL SULFOXIDE
lig 18
HEM
B
305 43PROTOPORPHYRIN IX CONTAINING FE
lig 19
GOL
B
306 6GLYCEROL
lig 20
PDN
B
307 2617,21-DIHYDROXYPREGNA-1,4-DIENE-3,11,20-TR
lig 21
PEG
B
308 7DI(HYDROXYETHYL)ETHER
lig 22
GOL
B
309 6GLYCEROL
lig 23
DMS
B
310 4DIMETHYL SULFOXIDE
lig 24
MG
B
311 1MAGNESIUM ION
lig 25
SO4
B
312 5SULFATE ION
lig 26
SO4
B
313 5SULFATE ION