Analysis of Ligand-Protein Contacts in PDB entry:
8S1P


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 222 ligands in PDB entry 8S1P. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
5MU
A
620 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 2
5MU
A
794 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 3
PSU
A
1001 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 4
5MU
A
1968 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 5
OMG
A
2280 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 6
2MG
A
2474 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 7
H2U
A
2478 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 8
PSU
A
2486 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 9
2MA
A
2532 232-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 10
PSU
A
2533 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 11
OMG
A
2582 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 12
G7M
A
2603 24N7-METHYL-GUANOSINE-5'-MONOPHOSPHATE
lig 13
ZN
4
101 1ZINC ION
lig 14
ZN
6
5001 1ZINC ION
lig 15
K
A
3001 1POTASSIUM ION
lig 16
K
A
3002 1POTASSIUM ION
lig 17
K
A
3003 1POTASSIUM ION
lig 18
K
A
3004 1POTASSIUM ION
lig 19
K
A
3005 1POTASSIUM ION
lig 20
K
A
3006 1POTASSIUM ION
lig 21
K
A
3007 1POTASSIUM ION
lig 22
K
A
3008 1POTASSIUM ION
lig 23
K
A
3009 1POTASSIUM ION
lig 24
K
A
3010 1POTASSIUM ION
lig 25
K
A
3011 1POTASSIUM ION
lig 26
K
A
3012 1POTASSIUM ION
lig 27
K
A
3013 1POTASSIUM ION
lig 28
K
A
3014 1POTASSIUM ION
lig 29
K
A
3015 1POTASSIUM ION
lig 30
K
A
3016 1POTASSIUM ION
lig 31
K
A
3017 1POTASSIUM ION
lig 32
K
A
3018 1POTASSIUM ION
lig 33
K
A
3019 1POTASSIUM ION
lig 34
K
A
3020 1POTASSIUM ION
lig 35
K
A
3021 1POTASSIUM ION
lig 36
K
A
3022 1POTASSIUM ION
lig 37
K
A
3023 1POTASSIUM ION
lig 38
K
A
3024 1POTASSIUM ION
lig 39
K
A
3025 1POTASSIUM ION
lig 40
K
A
3026 1POTASSIUM ION
lig 41
K
A
3027 1POTASSIUM ION
lig 42
K
A
3028 1POTASSIUM ION
lig 43
K
A
3029 1POTASSIUM ION
lig 44
K
A
3030 1POTASSIUM ION
lig 45
K
A
3031 1POTASSIUM ION
lig 46
CLM
A
3032 20CHLORAMPHENICOL
lig 47
K
A
3033 1POTASSIUM ION
lig 48
K
A
3034 1POTASSIUM ION
lig 49
K
A
3035 1POTASSIUM ION
lig 50
K
A
3036 1POTASSIUM ION
lig 51
K
A
3037 1POTASSIUM ION
lig 52
K
A
3038 1POTASSIUM ION
lig 53
K
A
3039 1POTASSIUM ION
lig 54
K
A
3040 1POTASSIUM ION
lig 55
K
A
3041 1POTASSIUM ION
lig 56
K
A
3042 1POTASSIUM ION
lig 57
K
A
3043 1POTASSIUM ION
lig 58
K
A
3044 1POTASSIUM ION
lig 59
K
A
3045 1POTASSIUM ION
lig 60
K
A
3046 1POTASSIUM ION
lig 61
MG
A
3047 1MAGNESIUM ION
lig 62
MG
A
3048 1MAGNESIUM ION
lig 63
MG
A
3049 1MAGNESIUM ION
lig 64
MG
A
3050 1MAGNESIUM ION
lig 65
MG
A
3051 1MAGNESIUM ION
lig 66
MG
A
3052 1MAGNESIUM ION
lig 67
MG
A
3053 1MAGNESIUM ION
lig 68
MG
A
3054 1MAGNESIUM ION
lig 69
MG
A
3055 1MAGNESIUM ION
lig 70
MG
A
3056 1MAGNESIUM ION
lig 71
MG
A
3057 1MAGNESIUM ION
lig 72
MG
A
3058 1MAGNESIUM ION
lig 73
MG
A
3059 1MAGNESIUM ION
lig 74
MG
A
3060 1MAGNESIUM ION
lig 75
MG
A
3061 1MAGNESIUM ION
lig 76
MG
A
3062 1MAGNESIUM ION
lig 77
MG
A
3063 1MAGNESIUM ION
lig 78
MG
A
3064 1MAGNESIUM ION
lig 79
MG
A
3065 1MAGNESIUM ION
lig 80
MG
A
3066 1MAGNESIUM ION
lig 81
MG
A
3067 1MAGNESIUM ION
lig 82
MG
A
3068 1MAGNESIUM ION
lig 83
MG
A
3069 1MAGNESIUM ION
lig 84
MG
A
3070 1MAGNESIUM ION
lig 85
MG
A
3071 1MAGNESIUM ION
lig 86
MG
A
3072 1MAGNESIUM ION
lig 87
MG
A
3073 1MAGNESIUM ION
lig 88
MG
A
3074 1MAGNESIUM ION
lig 89
MG
A
3075 1MAGNESIUM ION
lig 90
MG
A
3076 1MAGNESIUM ION
lig 91
MG
A
3077 1MAGNESIUM ION
lig 92
MG
A
3078 1MAGNESIUM ION
lig 93
MG
A
3079 1MAGNESIUM ION
lig 94
MG
A
3080 1MAGNESIUM ION
lig 95
MG
A
3081 1MAGNESIUM ION
lig 96
MG
A
3082 1MAGNESIUM ION
lig 97
MG
A
3083 1MAGNESIUM ION
lig 98
MG
A
3084 1MAGNESIUM ION
lig 99
MG
A
3085 1MAGNESIUM ION
lig 100
MG
A
3086 1MAGNESIUM ION
lig 101
MG
A
3087 1MAGNESIUM ION
lig 102
MG
A
3088 1MAGNESIUM ION
lig 103
MG
A
3089 1MAGNESIUM ION
lig 104
MG
A
3090 1MAGNESIUM ION
lig 105
MG
A
3091 1MAGNESIUM ION
lig 106
MG
A
3092 1MAGNESIUM ION
lig 107
MG
A
3093 1MAGNESIUM ION
lig 108
MG
A
3094 1MAGNESIUM ION
lig 109
MG
A
3095 1MAGNESIUM ION
lig 110
MG
A
3096 1MAGNESIUM ION
lig 111
MG
A
3097 1MAGNESIUM ION
lig 112
MG
A
3098 1MAGNESIUM ION
lig 113
MG
A
3099 1MAGNESIUM ION
lig 114
MG
A
3100 1MAGNESIUM ION
lig 115
MG
A
3101 1MAGNESIUM ION
lig 116
MG
A
3102 1MAGNESIUM ION
lig 117
MG
A
3103 1MAGNESIUM ION
lig 118
MG
A
3104 1MAGNESIUM ION
lig 119
MG
A
3105 1MAGNESIUM ION
lig 120
MG
A
3106 1MAGNESIUM ION
lig 121
MG
A
3107 1MAGNESIUM ION
lig 122
MG
A
3108 1MAGNESIUM ION
lig 123
MG
A
3109 1MAGNESIUM ION
lig 124
MG
A
3110 1MAGNESIUM ION
lig 125
MG
A
3111 1MAGNESIUM ION
lig 126
MG
A
3112 1MAGNESIUM ION
lig 127
MG
A
3113 1MAGNESIUM ION
lig 128
MG
A
3114 1MAGNESIUM ION
lig 129
MG
A
3115 1MAGNESIUM ION
lig 130
MG
A
3116 1MAGNESIUM ION
lig 131
MG
A
3117 1MAGNESIUM ION
lig 132
MG
A
3118 1MAGNESIUM ION
lig 133
MG
A
3119 1MAGNESIUM ION
lig 134
MG
A
3120 1MAGNESIUM ION
lig 135
MG
A
3121 1MAGNESIUM ION
lig 136
MG
A
3122 1MAGNESIUM ION
lig 137
MG
A
3123 1MAGNESIUM ION
lig 138
MG
A
3124 1MAGNESIUM ION
lig 139
MG
A
3125 1MAGNESIUM ION
lig 140
MG
A
3126 1MAGNESIUM ION
lig 141
MG
A
3127 1MAGNESIUM ION
lig 142
MG
A
3128 1MAGNESIUM ION
lig 143
MG
A
3129 1MAGNESIUM ION
lig 144
MG
A
3130 1MAGNESIUM ION
lig 145
MG
A
3131 1MAGNESIUM ION
lig 146
MG
A
3132 1MAGNESIUM ION
lig 147
MG
A
3133 1MAGNESIUM ION
lig 148
MG
A
3134 1MAGNESIUM ION
lig 149
MG
A
3135 1MAGNESIUM ION
lig 150
MG
A
3136 1MAGNESIUM ION
lig 151
MG
A
3137 1MAGNESIUM ION
lig 152
MG
A
3138 1MAGNESIUM ION
lig 153
MG
A
3139 1MAGNESIUM ION
lig 154
MG
A
3140 1MAGNESIUM ION
lig 155
MG
A
3141 1MAGNESIUM ION
lig 156
MG
A
3142 1MAGNESIUM ION
lig 157
MG
A
3143 1MAGNESIUM ION
lig 158
MG
A
3144 1MAGNESIUM ION
lig 159
MG
A
3145 1MAGNESIUM ION
lig 160
MG
A
3146 1MAGNESIUM ION
lig 161
MG
A
3147 1MAGNESIUM ION
lig 162
MG
A
3148 1MAGNESIUM ION
lig 163
MG
A
3149 1MAGNESIUM ION
lig 164
MG
A
3150 1MAGNESIUM ION
lig 165
MG
A
3151 1MAGNESIUM ION
lig 166
MG
A
3152 1MAGNESIUM ION
lig 167
MG
A
3153 1MAGNESIUM ION
lig 168
MG
A
3154 1MAGNESIUM ION
lig 169
MG
A
3155 1MAGNESIUM ION
lig 170
MG
A
3156 1MAGNESIUM ION
lig 171
MG
A
3157 1MAGNESIUM ION
lig 172
MG
A
3158 1MAGNESIUM ION
lig 173
MG
A
3159 1MAGNESIUM ION
lig 174
MG
A
3160 1MAGNESIUM ION
lig 175
MG
A
3161 1MAGNESIUM ION
lig 176
MG
A
3162 1MAGNESIUM ION
lig 177
MG
A
3163 1MAGNESIUM ION
lig 178
MG
A
3164 1MAGNESIUM ION
lig 179
MG
A
3165 1MAGNESIUM ION
lig 180
MG
A
3166 1MAGNESIUM ION
lig 181
MG
A
3167 1MAGNESIUM ION
lig 182
MG
A
3168 1MAGNESIUM ION
lig 183
MG
A
3169 1MAGNESIUM ION
lig 184
MG
A
3170 1MAGNESIUM ION
lig 185
MG
A
3171 1MAGNESIUM ION
lig 186
MG
A
3172 1MAGNESIUM ION
lig 187
MG
A
3173 1MAGNESIUM ION
lig 188
MG
A
3174 1MAGNESIUM ION
lig 189
MG
A
3175 1MAGNESIUM ION
lig 190
MG
A
3176 1MAGNESIUM ION
lig 191
MG
A
3177 1MAGNESIUM ION
lig 192
MG
A
3178 1MAGNESIUM ION
lig 193
MG
A
3179 1MAGNESIUM ION
lig 194
MG
A
3180 1MAGNESIUM ION
lig 195
MG
A
3181 1MAGNESIUM ION
lig 196
MG
A
3182 1MAGNESIUM ION
lig 197
MG
A
3183 1MAGNESIUM ION
lig 198
MG
A
3184 1MAGNESIUM ION
lig 199
MG
A
3185 1MAGNESIUM ION
lig 200
MG
A
3186 1MAGNESIUM ION
lig 201
MG
A
3187 1MAGNESIUM ION
lig 202
MG
A
3188 1MAGNESIUM ION
lig 203
MG
A
3189 1MAGNESIUM ION
lig 204
MG
A
3190 1MAGNESIUM ION
lig 205
MG
A
3191 1MAGNESIUM ION
lig 206
MG
A
3192 1MAGNESIUM ION
lig 207
MG
A
3193 1MAGNESIUM ION
lig 208
MG
A
3194 1MAGNESIUM ION
lig 209
MG
A
3195 1MAGNESIUM ION
lig 210
MG
A
3196 1MAGNESIUM ION
lig 211
MG
A
3197 1MAGNESIUM ION
lig 212
MG
A
3198 1MAGNESIUM ION
lig 213
MG
A
3199 1MAGNESIUM ION
lig 214
MG
A
3200 1MAGNESIUM ION
lig 215
K
C
301 1POTASSIUM ION
lig 216
K
C
302 1POTASSIUM ION
lig 217
MG
C
303 1MAGNESIUM ION
lig 218
MG
D
301 1MAGNESIUM ION
lig 219
MG
N
201 1MAGNESIUM ION
lig 220
MG
a
101 1MAGNESIUM ION
lig 221
ZN
0
5001 1ZINC ION
lig 222
ZN
1
101 1ZINC ION