Analysis of Ligand-Protein Contacts in PDB entry:
8S3E


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 68 ligands in PDB entry 8S3E. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CLR
A
1201 28CHOLESTEROL
lig 2
CLR
A
1202 28CHOLESTEROL
lig 3
CLR
A
1203 28CHOLESTEROL
lig 4
CLR
A
1204 28CHOLESTEROL
lig 5
CA
A
1205 1CALCIUM ION
lig 6
CA
A
1206 1CALCIUM ION
lig 7
6PL
A
1207 29 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 8
6PL
A
1208 26 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 9
6PL
A
1209 33 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 10
6PL
A
1210 27 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 11
6PL
A
1211 16 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 12
6PL
A
1212 23 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 13
6PL
A
1213 22 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 14
6PL
A
1214 23 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 15
MG
A
1215 1MAGNESIUM ION
lig 16
6PL
A
1216 19 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 17
K
A
1217 1POTASSIUM ION
lig 18
K
A
1218 1POTASSIUM ION
lig 19
MG
B
1201 1MAGNESIUM ION
lig 20
6PL
B
1202 19 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 21
CLR
B
1203 28CHOLESTEROL
lig 22
CLR
B
1204 28CHOLESTEROL
lig 23
CLR
B
1205 28CHOLESTEROL
lig 24
CLR
B
1206 28CHOLESTEROL
lig 25
CA
B
1207 1CALCIUM ION
lig 26
CA
B
1208 1CALCIUM ION
lig 27
6PL
B
1209 29 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 28
6PL
B
1210 26 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 29
6PL
B
1211 33 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 30
6PL
B
1212 27 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 31
6PL
B
1213 16 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 32
6PL
B
1214 23 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 33
6PL
B
1215 22 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 34
6PL
B
1216 23 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 35
K
B
1217 1POTASSIUM ION
lig 36
MG
C
1201 1MAGNESIUM ION
lig 37
6PL
C
1202 19 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 38
CLR
C
1203 28CHOLESTEROL
lig 39
CLR
C
1204 28CHOLESTEROL
lig 40
CLR
C
1205 28CHOLESTEROL
lig 41
CLR
C
1206 28CHOLESTEROL
lig 42
CA
C
1207 1CALCIUM ION
lig 43
CA
C
1208 1CALCIUM ION
lig 44
6PL
C
1209 29 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 45
6PL
C
1210 26 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 46
6PL
C
1211 33 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 47
6PL
C
1212 27 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 48
6PL
C
1213 16 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 49
6PL
C
1214 23 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 50
6PL
C
1215 22 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 51
6PL
C
1216 23 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 52
MG
D
1201 1MAGNESIUM ION
lig 53
6PL
D
1202 19 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 54
CLR
D
1203 28CHOLESTEROL
lig 55
CLR
D
1204 28CHOLESTEROL
lig 56
CLR
D
1205 28CHOLESTEROL
lig 57
CLR
D
1206 28CHOLESTEROL
lig 58
CA
D
1207 1CALCIUM ION
lig 59
CA
D
1208 1CALCIUM ION
lig 60
6PL
D
1209 29 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 61
6PL
D
1210 26 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 62
6PL
D
1211 33 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 63
6PL
D
1212 27 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 64
6PL
D
1213 16 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 65
6PL
D
1214 23 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 66
6PL
D
1215 22 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 67
6PL
D
1216 23 PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE
lig 68
K
D
1217 1POTASSIUM ION