Analysis of Ligand-Protein Contacts in PDB entry:
8S8H


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 144 ligands in PDB entry 8S8H. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PSU
2
120 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 2
PSU
2
465 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 3
PSU
2
766 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 4
PSU
2
998 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 5
5MC
2
1006 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 6
B8N
2
1190 28 ACID
lig 7
PSU
2
1289 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 8
2MG
2
1426 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 9
2MG
2
1570 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 10
7MG
2
1573 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 11
5MC
2
1637 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 12
MA6
2
1780 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 13
1MG
1
9 241N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 14
2MG
1
10 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 15
H2U
1
16 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 16
M2G
1
26 25N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
lig 17
T6A
1
37 32 CARBAMOYL]THREONINE-5'-MONOPHOSPHATE
lig 18
7MG
1
46 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 19
H2U
1
47 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 20
5MC
1
48 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 21
5MC
1
49 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 22
1MA
1
58 236-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 23
RIA
1
64 352'-O-[(5'-PHOSPHO)RIBOSYL]ADENOSINE-5'-MON
lig 24
MG
2
1801 1MAGNESIUM ION
lig 25
MG
2
1802 1MAGNESIUM ION
lig 26
MG
2
1803 1MAGNESIUM ION
lig 27
MG
2
1804 1MAGNESIUM ION
lig 28
MG
2
1805 1MAGNESIUM ION
lig 29
MG
2
1806 1MAGNESIUM ION
lig 30
MG
2
1807 1MAGNESIUM ION
lig 31
MG
2
1808 1MAGNESIUM ION
lig 32
MG
2
1809 1MAGNESIUM ION
lig 33
MG
2
1810 1MAGNESIUM ION
lig 34
MG
2
1811 1MAGNESIUM ION
lig 35
MG
2
1812 1MAGNESIUM ION
lig 36
MG
2
1813 1MAGNESIUM ION
lig 37
MG
2
1814 1MAGNESIUM ION
lig 38
MG
2
1815 1MAGNESIUM ION
lig 39
MG
2
1816 1MAGNESIUM ION
lig 40
MG
2
1817 1MAGNESIUM ION
lig 41
MG
2
1818 1MAGNESIUM ION
lig 42
MG
2
1819 1MAGNESIUM ION
lig 43
MG
2
1820 1MAGNESIUM ION
lig 44
MG
2
1821 1MAGNESIUM ION
lig 45
MG
2
1822 1MAGNESIUM ION
lig 46
MG
2
1823 1MAGNESIUM ION
lig 47
MG
2
1824 1MAGNESIUM ION
lig 48
MG
2
1825 1MAGNESIUM ION
lig 49
MG
2
1826 1MAGNESIUM ION
lig 50
MG
2
1827 1MAGNESIUM ION
lig 51
MG
2
1828 1MAGNESIUM ION
lig 52
MG
2
1829 1MAGNESIUM ION
lig 53
MG
2
1830 1MAGNESIUM ION
lig 54
MG
2
1831 1MAGNESIUM ION
lig 55
MG
2
1832 1MAGNESIUM ION
lig 56
MG
2
1833 1MAGNESIUM ION
lig 57
MG
2
1834 1MAGNESIUM ION
lig 58
MG
2
1835 1MAGNESIUM ION
lig 59
MG
2
1836 1MAGNESIUM ION
lig 60
MG
2
1837 1MAGNESIUM ION
lig 61
MG
2
1838 1MAGNESIUM ION
lig 62
MG
2
1839 1MAGNESIUM ION
lig 63
MG
2
1840 1MAGNESIUM ION
lig 64
MG
2
1841 1MAGNESIUM ION
lig 65
MG
2
1842 1MAGNESIUM ION
lig 66
MG
2
1843 1MAGNESIUM ION
lig 67
MG
2
1844 1MAGNESIUM ION
lig 68
MG
2
1845 1MAGNESIUM ION
lig 69
MG
2
1846 1MAGNESIUM ION
lig 70
MG
2
1847 1MAGNESIUM ION
lig 71
MG
2
1848 1MAGNESIUM ION
lig 72
MG
2
1849 1MAGNESIUM ION
lig 73
MG
2
1850 1MAGNESIUM ION
lig 74
MG
2
1851 1MAGNESIUM ION
lig 75
MG
2
1852 1MAGNESIUM ION
lig 76
MG
2
1853 1MAGNESIUM ION
lig 77
MG
2
1854 1MAGNESIUM ION
lig 78
MG
2
1855 1MAGNESIUM ION
lig 79
MG
2
1856 1MAGNESIUM ION
lig 80
MG
2
1857 1MAGNESIUM ION
lig 81
MG
2
1858 1MAGNESIUM ION
lig 82
MG
2
1859 1MAGNESIUM ION
lig 83
MG
2
1860 1MAGNESIUM ION
lig 84
MG
2
1861 1MAGNESIUM ION
lig 85
MG
2
1862 1MAGNESIUM ION
lig 86
MG
2
1863 1MAGNESIUM ION
lig 87
MG
2
1864 1MAGNESIUM ION
lig 88
MG
2
1865 1MAGNESIUM ION
lig 89
MG
2
1866 1MAGNESIUM ION
lig 90
MG
2
1867 1MAGNESIUM ION
lig 91
MG
2
1868 1MAGNESIUM ION
lig 92
MG
2
1869 1MAGNESIUM ION
lig 93
MG
2
1870 1MAGNESIUM ION
lig 94
MG
2
1871 1MAGNESIUM ION
lig 95
MG
2
1872 1MAGNESIUM ION
lig 96
MG
2
1873 1MAGNESIUM ION
lig 97
MG
2
1874 1MAGNESIUM ION
lig 98
MG
2
1875 1MAGNESIUM ION
lig 99
MG
2
1876 1MAGNESIUM ION
lig 100
MG
2
1877 1MAGNESIUM ION
lig 101
MG
2
1878 1MAGNESIUM ION
lig 102
MG
2
1879 1MAGNESIUM ION
lig 103
MG
2
1880 1MAGNESIUM ION
lig 104
MG
2
1881 1MAGNESIUM ION
lig 105
MG
2
1882 1MAGNESIUM ION
lig 106
MG
2
1883 1MAGNESIUM ION
lig 107
MG
2
1884 1MAGNESIUM ION
lig 108
MG
2
1885 1MAGNESIUM ION
lig 109
MG
2
1886 1MAGNESIUM ION
lig 110
MG
2
1887 1MAGNESIUM ION
lig 111
MG
2
1888 1MAGNESIUM ION
lig 112
MG
2
1889 1MAGNESIUM ION
lig 113
MG
2
1890 1MAGNESIUM ION
lig 114
MG
2
1891 1MAGNESIUM ION
lig 115
MG
2
1892 1MAGNESIUM ION
lig 116
MG
2
1893 1MAGNESIUM ION
lig 117
MG
2
1894 1MAGNESIUM ION
lig 118
MG
2
1895 1MAGNESIUM ION
lig 119
MG
2
1896 1MAGNESIUM ION
lig 120
MG
2
1897 1MAGNESIUM ION
lig 121
MG
2
1898 1MAGNESIUM ION
lig 122
MG
2
1899 1MAGNESIUM ION
lig 123
MG
2
1900 1MAGNESIUM ION
lig 124
MG
2
1901 1MAGNESIUM ION
lig 125
MG
2
1902 1MAGNESIUM ION
lig 126
MG
2
1903 1MAGNESIUM ION
lig 127
MG
2
1904 1MAGNESIUM ION
lig 128
MG
2
1905 1MAGNESIUM ION
lig 129
MG
2
1906 1MAGNESIUM ION
lig 130
MG
2
1907 1MAGNESIUM ION
lig 131
MG
2
1908 1MAGNESIUM ION
lig 132
MG
2
1909 1MAGNESIUM ION
lig 133
MG
2
1910 1MAGNESIUM ION
lig 134
MG
2
1911 1MAGNESIUM ION
lig 135
MG
N
201 1MAGNESIUM ION
lig 136
ZN
a
500 1ZINC ION
lig 137
ZN
b
101 1ZINC ION
lig 138
MG
Q
201 1MAGNESIUM ION
lig 139
ZN
f
501 1ZINC ION
lig 140
MG
i
201 1MAGNESIUM ION
lig 141
MG
3
101 1MAGNESIUM ION
lig 142
GCP
k
601 32PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE EST
lig 143
MG
k
602 1MAGNESIUM ION
lig 144
MET
k
603 8METHIONINE