Analysis of Ligand-Protein Contacts in PDB entry:
8SE2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 19 ligands in PDB entry 8SE2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
500 11PHOSPHOTHREONINE
lig 2
TPO
A
642 11PHOSPHOTHREONINE
lig 3
SEP
A
661 10PHOSPHOSERINE
lig 4
TPO
B
500 11PHOSPHOTHREONINE
lig 5
TPO
B
642 11PHOSPHOTHREONINE
lig 6
SEP
B
661 10PHOSPHOSERINE
lig 7
GOL
A
701 6GLYCEROL
lig 8
ZN
A
702 1ZINC ION
lig 9
ZN
A
703 1ZINC ION
lig 10
ZN
A
704 1ZINC ION
lig 11
ZN
A
705 1ZINC ION
lig 12
ANP
B
701 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 13
MN
B
702 1MANGANESE (II) ION
lig 14
MN
B
703 1MANGANESE (II) ION
lig 15
ZN
B
704 1ZINC ION
lig 16
ZN
B
705 1ZINC ION
lig 17
ZN
B
706 1ZINC ION
lig 18
ZN
B
707 1ZINC ION
lig 19
CA
B
708 1CALCIUM ION