Analysis of Ligand-Protein Contacts in PDB entry:
8SID


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 8SID. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 7
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
G
6 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
G
7 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
G
8 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
G
9 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
G
10 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 17
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 20
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
A
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
ABU
A
402 7GAMMA-AMINO-BUTANOIC ACID
lig 24
ZWY
A
403 2517-OXOANDROST-5-EN-3BETA-YL HYDROGEN SULFA
lig 25
PTY
B
401 50PHOSPHATIDYLETHANOLAMINE
lig 26
PTY
B
402 43PHOSPHATIDYLETHANOLAMINE
lig 27
PTY
B
403 49PHOSPHATIDYLETHANOLAMINE
lig 28
NAG
C
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
ABU
C
402 7GAMMA-AMINO-BUTANOIC ACID
lig 30
Q3G
C
403 41 PROPOXY](HYDROXY)PHOSPHORYL]-D-SERINE
lig 31
POV
D
401 37 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 32
PTY
D
402 46PHOSPHATIDYLETHANOLAMINE
lig 33
PTY
D
403 50PHOSPHATIDYLETHANOLAMINE
lig 34
PTY
D
404 42PHOSPHATIDYLETHANOLAMINE