Analysis of Ligand-Protein Contacts in PDB entry:
8TDI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 8TDI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAD
L
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 2
SO4
L
502 5SULFATE ION
lig 3
NAD
J
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 4
TRS
J
502 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 5
SO4
J
503 5SULFATE ION
lig 6
NAD
A
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 7
TRS
A
502 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 8
SO4
A
503 5SULFATE ION
lig 9
NAD
C
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 10
SO4
C
502 5SULFATE ION
lig 11
NAD
D
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 12
TRS
D
502 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 13
SO4
D
503 5SULFATE ION
lig 14
NAD
E
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 15
SO4
E
502 5SULFATE ION
lig 16
SO4
E
503 5SULFATE ION
lig 17
NAD
F
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 18
TRS
F
502 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 19
SO4
F
503 5SULFATE ION
lig 20
NAD
G
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 21
TRS
G
502 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 22
SO4
G
503 5SULFATE ION
lig 23
NAD
H
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 24
TRS
H
502 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 25
SO4
H
503 5SULFATE ION
lig 26
NAD
I
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 27
TRS
I
502 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 28
SO4
I
503 5SULFATE ION
lig 29
NAD
B
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 30
TRS
B
502 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 31
SO4
B
503 5SULFATE ION
lig 32
NAD
K
501 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 33
SO4
K
502 5SULFATE ION
lig 34
SO4
K
503 5SULFATE ION