Analysis of Ligand-Protein Contacts in PDB entry:
8TJ9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 8TJ9. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 7
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 10
NAG
F
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
GAL
F
2 11BETA-D-GALACTOPYRANOSE
lig 12
NAG
F
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
GAL
F
4 11BETA-D-GALACTOPYRANOSE
lig 14
SIA
F
5 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 15
NAG
A
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
A
402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
A
403 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
PEG
A
404 7DI(HYDROXYETHYL)ETHER
lig 19
PEG
A
405 7DI(HYDROXYETHYL)ETHER
lig 20
SO4
A
406 5SULFATE ION
lig 21
SO4
A
407 5SULFATE ION
lig 22
EDO
B
201 41,2-ETHANEDIOL
lig 23
PG4
B
202 13TETRAETHYLENE GLYCOL
lig 24
EDO
B
203 41,2-ETHANEDIOL
lig 25
PEG
B
204 7DI(HYDROXYETHYL)ETHER
lig 26
EDO
B
205 41,2-ETHANEDIOL
lig 27
PGE
B
206 10TRIETHYLENE GLYCOL
lig 28
SO4
B
207 5SULFATE ION
lig 29
SO4
B
208 5SULFATE ION