Analysis of Ligand-Protein Contacts in PDB entry:
8U04


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 8U04. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CME
A
149 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 2
CME
B
149 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 3
CME
C
149 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 4
IOD
A
301 1IODIDE ION
lig 5
IOD
A
302 1IODIDE ION
lig 6
CL
A
303 1CHLORIDE ION
lig 7
IOD
A
304 1IODIDE ION
lig 8
GOL
B
301 6GLYCEROL
lig 9
IOD
B
302 1IODIDE ION
lig 10
IOD
B
303 1IODIDE ION
lig 11
IOD
C
301 1IODIDE ION
lig 12
IOD
C
302 1IODIDE ION
lig 13
CL
C
303 1CHLORIDE ION
lig 14
IOD
D
301 1IODIDE ION
lig 15
EDO
D
302 41,2-ETHANEDIOL
lig 16
CL
D
303 1CHLORIDE ION