Analysis of Ligand-Protein Contacts in PDB entry:
8U3P


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 8U3P. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NA
A
1001 1SODIUM ION
lig 2
HEM
A
1002 43PROTOPORPHYRIN IX CONTAINING FE
lig 3
ACT
A
1003 4ACETATE ION
lig 4
GOL
A
1004 6GLYCEROL
lig 5
GOL
A
1005 6GLYCEROL
lig 6
GOL
A
1006 6GLYCEROL
lig 7
GOL
A
1007 6GLYCEROL
lig 8
NA
B
1001 1SODIUM ION
lig 9
HEM
B
1002 43PROTOPORPHYRIN IX CONTAINING FE
lig 10
ACT
B
1003 4ACETATE ION
lig 11
ACT
B
1004 4ACETATE ION
lig 12
GOL
B
1005 6GLYCEROL
lig 13
GOL
B
1006 6GLYCEROL
lig 14
GOL
B
1007 6GLYCEROL
lig 15
GOL
B
1008 6GLYCEROL
lig 16
GOL
B
1009 6GLYCEROL
lig 17
NA
C
1001 1SODIUM ION
lig 18
HEM
C
1002 43PROTOPORPHYRIN IX CONTAINING FE
lig 19
GOL
C
1003 6GLYCEROL
lig 20
GOL
C
1004 6GLYCEROL
lig 21
NA
D
1001 1SODIUM ION
lig 22
HEM
D
1002 43PROTOPORPHYRIN IX CONTAINING FE
lig 23
ACT
D
1003 4ACETATE ION
lig 24
GOL
D
1004 6GLYCEROL
lig 25
GOL
D
1005 6GLYCEROL
lig 26
GOL
D
1006 6GLYCEROL
lig 27
GOL
D
1007 6GLYCEROL
lig 28
GOL
D
1008 6GLYCEROL
lig 29
GOL
D
1009 6GLYCEROL