Analysis of Ligand-Protein Contacts in PDB entry:
8UCB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 15 ligands in PDB entry 8UCB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
A
342 11PHOSPHOTHREONINE
lig 2
TPO
A
345 11PHOSPHOTHREONINE
lig 3
SEP
A
346 10PHOSPHOSERINE
lig 4
TPO
B
342 11PHOSPHOTHREONINE
lig 5
TPO
B
345 11PHOSPHOTHREONINE
lig 6
SEP
B
346 10PHOSPHOSERINE
lig 7
TPO
C
345 11PHOSPHOTHREONINE
lig 8
SEP
C
346 10PHOSPHOSERINE
lig 9
TPO
D
342 11PHOSPHOTHREONINE
lig 10
TPO
D
345 11PHOSPHOTHREONINE
lig 11
SEP
D
346 10PHOSPHOSERINE
lig 12
X1T
A
501 30 CARBOXAMIDE
lig 13
X1T
B
501 30 CARBOXAMIDE
lig 14
X1T
C
501 30 CARBOXAMIDE
lig 15
X1T
D
501 30 CARBOXAMIDE