Analysis of Ligand-Protein Contacts in PDB entry:
8V1F


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 39 ligands in PDB entry 8V1F. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
F
3 10ALPHA-L-FUCOPYRANOSE
lig 6
TAM
A
601 11TRIS(HYDROXYETHYL)AMINOMETHANE
lig 7
UNX
A
602 1UNKNOWN ATOM OR ION
lig 8
EDO
A
603 41,2-ETHANEDIOL
lig 9
EDO
A
604 41,2-ETHANEDIOL
lig 10
EDO
A
605 41,2-ETHANEDIOL
lig 11
EDO
B
601 41,2-ETHANEDIOL
lig 12
EDO
B
602 41,2-ETHANEDIOL
lig 13
TAM
B
603 11TRIS(HYDROXYETHYL)AMINOMETHANE
lig 14
7R8
B
604 146-OXIDANYLNAPHTHALENE-2-CARBOXIMIDAMIDE
lig 15
TAM
B
605 11TRIS(HYDROXYETHYL)AMINOMETHANE
lig 16
EDO
B
606 41,2-ETHANEDIOL
lig 17
EDO
B
607 41,2-ETHANEDIOL
lig 18
EDO
B
608 41,2-ETHANEDIOL
lig 19
EDO
B
609 41,2-ETHANEDIOL
lig 20
EDO
B
610 41,2-ETHANEDIOL
lig 21
EDO
B
611 41,2-ETHANEDIOL
lig 22
EDO
B
612 41,2-ETHANEDIOL
lig 23
PEG
C
301 7DI(HYDROXYETHYL)ETHER
lig 24
CIT
C
302 13CITRIC ACID
lig 25
UNX
C
303 1UNKNOWN ATOM OR ION
lig 26
EDO
C
304 41,2-ETHANEDIOL
lig 27
PG4
C
305 13TETRAETHYLENE GLYCOL
lig 28
CIT
C
306 13CITRIC ACID
lig 29
UNX
D
601 1UNKNOWN ATOM OR ION
lig 30
TAM
D
602 11TRIS(HYDROXYETHYL)AMINOMETHANE
lig 31
7R8
D
603 146-OXIDANYLNAPHTHALENE-2-CARBOXIMIDAMIDE
lig 32
EDO
D
604 41,2-ETHANEDIOL
lig 33
EDO
D
605 41,2-ETHANEDIOL
lig 34
EDO
D
606 41,2-ETHANEDIOL
lig 35
PG4
D
607 13TETRAETHYLENE GLYCOL
lig 36
EDO
D
608 41,2-ETHANEDIOL
lig 37
EDO
D
609 41,2-ETHANEDIOL
lig 38
EDO
D
610 41,2-ETHANEDIOL
lig 39
EDO
D
611 41,2-ETHANEDIOL