Analysis of Ligand-Protein Contacts in PDB entry:
8VCQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 87 ligands in PDB entry 8VCQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FRU
I
1 12BETA-D-FRUCTOFURANOSE
lig 2
GLC
I
2 11ALPHA-D-GLUCOPYRANOSE
lig 3
GLA
I
3 11ALPHA-D-GALACTOPYRANOSE
lig 4
FRU
L
1 12BETA-D-FRUCTOFURANOSE
lig 5
GLC
L
2 11ALPHA-D-GLUCOPYRANOSE
lig 6
GLA
L
3 11ALPHA-D-GALACTOPYRANOSE
lig 7
FRU
M
1 12BETA-D-FRUCTOFURANOSE
lig 8
GLC
M
2 11ALPHA-D-GLUCOPYRANOSE
lig 9
GLA
M
3 11ALPHA-D-GALACTOPYRANOSE
lig 10
FRU
N
1 12BETA-D-FRUCTOFURANOSE
lig 11
GLC
N
2 11ALPHA-D-GLUCOPYRANOSE
lig 12
GLA
N
3 11ALPHA-D-GALACTOPYRANOSE
lig 13
FRU
O
1 12BETA-D-FRUCTOFURANOSE
lig 14
GLC
O
2 11ALPHA-D-GLUCOPYRANOSE
lig 15
GLA
O
3 11ALPHA-D-GALACTOPYRANOSE
lig 16
FRU
P
1 12BETA-D-FRUCTOFURANOSE
lig 17
GLC
P
2 11ALPHA-D-GLUCOPYRANOSE
lig 18
GLA
P
3 11ALPHA-D-GALACTOPYRANOSE
lig 19
FRU
Q
1 12BETA-D-FRUCTOFURANOSE
lig 20
GLC
Q
2 11ALPHA-D-GLUCOPYRANOSE
lig 21
GLA
Q
3 11ALPHA-D-GALACTOPYRANOSE
lig 22
FRU
R
1 12BETA-D-FRUCTOFURANOSE
lig 23
GLC
R
2 11ALPHA-D-GLUCOPYRANOSE
lig 24
GLA
R
3 11ALPHA-D-GALACTOPYRANOSE
lig 25
FRU
S
1 12BETA-D-FRUCTOFURANOSE
lig 26
GLC
S
2 11ALPHA-D-GLUCOPYRANOSE
lig 27
GLA
S
3 11ALPHA-D-GALACTOPYRANOSE
lig 28
FRU
T
1 12BETA-D-FRUCTOFURANOSE
lig 29
GLC
T
2 11ALPHA-D-GLUCOPYRANOSE
lig 30
GLA
T
3 11ALPHA-D-GALACTOPYRANOSE
lig 31
FRU
U
1 12BETA-D-FRUCTOFURANOSE
lig 32
GLC
U
2 11ALPHA-D-GLUCOPYRANOSE
lig 33
GLA
U
3 11ALPHA-D-GALACTOPYRANOSE
lig 34
FRU
V
1 1BETA-D-FRUCTOFURANOSE
lig 35
GLC
V
2 11ALPHA-D-GLUCOPYRANOSE
lig 36
GLA
V
3 11ALPHA-D-GALACTOPYRANOSE
lig 37
FRU
W
1 12BETA-D-FRUCTOFURANOSE
lig 38
GLC
W
2 11ALPHA-D-GLUCOPYRANOSE
lig 39
GLA
W
3 11ALPHA-D-GALACTOPYRANOSE
lig 40
FRU
X
1 12BETA-D-FRUCTOFURANOSE
lig 41
GLC
X
2 11ALPHA-D-GLUCOPYRANOSE
lig 42
GLA
X
3 11ALPHA-D-GALACTOPYRANOSE
lig 43
FRU
Y
1 12BETA-D-FRUCTOFURANOSE
lig 44
GLC
Y
2 11ALPHA-D-GLUCOPYRANOSE
lig 45
GLA
Y
3 11ALPHA-D-GALACTOPYRANOSE
lig 46
FRU
Z
1 12BETA-D-FRUCTOFURANOSE
lig 47
GLC
Z
2 11ALPHA-D-GLUCOPYRANOSE
lig 48
GLA
Z
3 11ALPHA-D-GALACTOPYRANOSE
lig 49
FRU
a
1 12BETA-D-FRUCTOFURANOSE
lig 50
GLC
a
2 11ALPHA-D-GLUCOPYRANOSE
lig 51
GLA
a
3 11ALPHA-D-GALACTOPYRANOSE
lig 52
FRU
b
1 12BETA-D-FRUCTOFURANOSE
lig 53
GLC
b
2 11ALPHA-D-GLUCOPYRANOSE
lig 54
GLA
b
3 11ALPHA-D-GALACTOPYRANOSE
lig 55
FRU
c
1 12BETA-D-FRUCTOFURANOSE
lig 56
GLC
c
2 11ALPHA-D-GLUCOPYRANOSE
lig 57
GLA
c
3 11ALPHA-D-GALACTOPYRANOSE
lig 58
FRU
d
1 12BETA-D-FRUCTOFURANOSE
lig 59
GLC
d
2 11ALPHA-D-GLUCOPYRANOSE
lig 60
GLA
d
3 11ALPHA-D-GALACTOPYRANOSE
lig 61
FRU
e
1 12BETA-D-FRUCTOFURANOSE
lig 62
GLC
e
2 11ALPHA-D-GLUCOPYRANOSE
lig 63
GLA
e
3 11ALPHA-D-GALACTOPYRANOSE
lig 64
FRU
f
1 12BETA-D-FRUCTOFURANOSE
lig 65
GLC
f
2 11ALPHA-D-GLUCOPYRANOSE
lig 66
GLA
f
3 11ALPHA-D-GALACTOPYRANOSE
lig 67
FRU
g
1 1BETA-D-FRUCTOFURANOSE
lig 68
GLC
g
2 11ALPHA-D-GLUCOPYRANOSE
lig 69
GLA
g
3 11ALPHA-D-GALACTOPYRANOSE
lig 70
FRU
h
1 1BETA-D-FRUCTOFURANOSE
lig 71
GLC
h
2 11ALPHA-D-GLUCOPYRANOSE
lig 72
GLA
h
3 11ALPHA-D-GALACTOPYRANOSE
lig 73
FRU
i
1 12BETA-D-FRUCTOFURANOSE
lig 74
GLC
i
2 11ALPHA-D-GLUCOPYRANOSE
lig 75
GLA
i
3 11ALPHA-D-GALACTOPYRANOSE
lig 76
FRU
j
1 12BETA-D-FRUCTOFURANOSE
lig 77
GLC
j
2 11ALPHA-D-GLUCOPYRANOSE
lig 78
GLA
j
3 11ALPHA-D-GALACTOPYRANOSE
lig 79
GLA
A
201 12ALPHA-D-GALACTOPYRANOSE
lig 80
EPE
D
201 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 81
PG4
D
202 13TETRAETHYLENE GLYCOL
lig 82
CA
D
203 1CALCIUM ION
lig 83
EPE
F
201 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 84
ACT
F
202 4ACETATE ION
lig 85
PG4
F
203 13TETRAETHYLENE GLYCOL
lig 86
GOL
F
204 6GLYCEROL
lig 87
GLA
G
201 12ALPHA-D-GALACTOPYRANOSE