Analysis of Ligand-Protein Contacts in PDB entry:
8VDX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 8VDX. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GOL
A
601 6GLYCEROL
lig 2
ACT
A
602 4ACETATE ION
lig 3
GOL
A
603 6GLYCEROL
lig 4
PGE
A
604 10TRIETHYLENE GLYCOL
lig 5
GOL
A
605 6GLYCEROL
lig 6
PG4
A
606 13TETRAETHYLENE GLYCOL
lig 7
GOL
B
701 6GLYCEROL
lig 8
GOL
B
702 6GLYCEROL
lig 9
GOL
B
703 6GLYCEROL
lig 10
ACT
B
704 4ACETATE ION
lig 11
ACT
B
705 4ACETATE ION
lig 12
GOL
B
706 6GLYCEROL
lig 13
GOL
B
707 6GLYCEROL
lig 14
GOL
B
708 6GLYCEROL
lig 15
GOL
B
709 6GLYCEROL
lig 16
GOL
B
710 6GLYCEROL