Analysis of Ligand-Protein Contacts in PDB entry:
8VGB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 8VGB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GDP
A
500 28GUANOSINE-5'-DIPHOSPHATE
lig 2
MG
A
501 1MAGNESIUM ION
lig 3
GDP
B
401 28GUANOSINE-5'-DIPHOSPHATE
lig 4
MG
B
402 1MAGNESIUM ION
lig 5
GDP
C
401 28GUANOSINE-5'-DIPHOSPHATE
lig 6
MG
C
402 1MAGNESIUM ION
lig 7
GDP
D
401 28GUANOSINE-5'-DIPHOSPHATE
lig 8
MG
D
402 1MAGNESIUM ION