Analysis of Ligand-Protein Contacts in PDB entry:
8VGV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 8VGV. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
M
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
M
6 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 10
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
O
5 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
O
6 11ALPHA-D-MANNOPYRANOSE
lig 16
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 19
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
Q
4 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
Q
5 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
Q
6 11ALPHA-D-MANNOPYRANOSE
lig 25
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
BMA
R
3 11BETA-D-MANNOPYRANOSE