Analysis of Ligand-Protein Contacts in PDB entry:
8VI8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 8VI8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
X5Z
A
301 20AZIDOBIS (DIMETHYLGLYOXIMATO) PYRIDINECOBA
lig 2
SO4
A
302 5SULFATE ION
lig 3
SO4
A
303 5SULFATE ION
lig 4
NA
A
304 1SODIUM ION
lig 5
X5Z
B
301 20AZIDOBIS (DIMETHYLGLYOXIMATO) PYRIDINECOBA
lig 6
SO4
B
302 5SULFATE ION
lig 7
SO4
B
303 5SULFATE ION
lig 8
NA
B
304 1SODIUM ION
lig 9
NA
B
305 1SODIUM ION
lig 10
X5Z
C
301 20AZIDOBIS (DIMETHYLGLYOXIMATO) PYRIDINECOBA
lig 11
SO4
C
302 5SULFATE ION
lig 12
SO4
C
303 5SULFATE ION
lig 13
SO4
C
304 5SULFATE ION
lig 14
NA
C
305 1SODIUM ION
lig 15
NA
C
306 1SODIUM ION
lig 16
NA
C
307 1SODIUM ION
lig 17
X5Z
D
301 20AZIDOBIS (DIMETHYLGLYOXIMATO) PYRIDINECOBA
lig 18
SO4
D
302 5SULFATE ION
lig 19
SO4
D
303 5SULFATE ION
lig 20
NA
D
304 1SODIUM ION
lig 21
X5Z
E
301 20AZIDOBIS (DIMETHYLGLYOXIMATO) PYRIDINECOBA
lig 22
SO4
E
302 5SULFATE ION
lig 23
NA
E
303 1SODIUM ION
lig 24
NA
E
304 1SODIUM ION
lig 25
NA
E
305 1SODIUM ION
lig 26
X5Z
F
301 20AZIDOBIS (DIMETHYLGLYOXIMATO) PYRIDINECOBA
lig 27
SO4
F
302 5SULFATE ION
lig 28
SO4
F
303 5SULFATE ION
lig 29
NA
F
304 1SODIUM ION