Analysis of Ligand-Protein Contacts in PDB entry:
8WDV

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 125 ligands in PDB entry 8WDV. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	FME	H	1	10	N-FORMYLMETHIONINE
lig 2	FME	A	5	10	N-FORMYLMETHIONINE
lig 3	FME	D	1	10	N-FORMYLMETHIONINE
lig 4	FME	I	5	10	N-FORMYLMETHIONINE
lig 5	FME	K	5	10	N-FORMYLMETHIONINE
lig 6	FME	O	5	10	N-FORMYLMETHIONINE
lig 7	FME	Q	5	10	N-FORMYLMETHIONINE
lig 8	FME	S	1	10	N-FORMYLMETHIONINE
lig 9	FME	U	1	10	N-FORMYLMETHIONINE
lig 10	FME	W	1	10	N-FORMYLMETHIONINE
lig 11	FME	Y	1	10	N-FORMYLMETHIONINE
lig 12	FME	1	5	10	N-FORMYLMETHIONINE
lig 13	FME	5	5	10	N-FORMYLMETHIONINE
lig 14	FME	9	5	10	N-FORMYLMETHIONINE
lig 15	HEM	C	401	43	PROTOPORPHYRIN IX CONTAINING FE
lig 16	HEM	C	402	43	PROTOPORPHYRIN IX CONTAINING FE
lig 17	HEM	C	403	43	PROTOPORPHYRIN IX CONTAINING FE
lig 18	HEM	C	404	43	PROTOPORPHYRIN IX CONTAINING FE
lig 19	MG	C	405	1	MAGNESIUM ION
lig 20	CA	C	406	1	CALCIUM ION
lig 21	Z41	C	407	35	(2S)-3-HYDROXYPROPANE-1,2-DIYL DIHEXADECAN
lig 22	PLM	C	408	12	PALMITIC ACID
lig 23	PGV	C	409	31	OCTADEC-11-ENOATE
lig 24	BCL	L	301	66	BACTERIOCHLOROPHYLL A
lig 25	BPH	L	302	65	BACTERIOPHEOPHYTIN A
lig 26	UQ8	L	303	33	UBIQUINONE-8
lig 27	UQ8	L	304	53	UBIQUINONE-8
lig 28	PGV	L	305	29	OCTADEC-11-ENOATE
lig 29	PGV	L	306	35	OCTADEC-11-ENOATE
lig 30	BCL	L	307	66	BACTERIOCHLOROPHYLL A
lig 31	UQ8	L	308	53	UBIQUINONE-8
lig 32	PGV	L	309	33	OCTADEC-11-ENOATE
lig 33	CA	M	401	1	CALCIUM ION
lig 34	FE	M	402	1	FE (III) ION
lig 35	BCL	M	403	66	BACTERIOCHLOROPHYLL A
lig 36	BCL	M	404	66	BACTERIOCHLOROPHYLL A
lig 37	BPH	M	405	65	BACTERIOPHEOPHYTIN A
lig 38	MQ8	M	406	53	MENAQUINONE 8
lig 39	CRT	M	407	44	SPIRILLOXANTHIN
lig 40	PGV	M	408	37	OCTADEC-11-ENOATE
lig 41	CDL	M	409	39	CARDIOLIPIN
lig 42	PGV	M	410	27	OCTADEC-11-ENOATE
lig 43	CDL	M	411	95	CARDIOLIPIN
lig 44	CDL	M	412	84	CARDIOLIPIN
lig 45	LDA	M	413	16	LAURYL DIMETHYLAMINE-N-OXIDE
lig 46	LMT	M	414	35	DODECYL-BETA-D-MALTOSIDE
lig 47	PGV	H	301	36	OCTADEC-11-ENOATE
lig 48	CDL	H	302	79	CARDIOLIPIN
lig 49	LMT	H	303	35	DODECYL-BETA-D-MALTOSIDE
lig 50	BCL	A	101	66	BACTERIOCHLOROPHYLL A
lig 51	LMT	B	101	35	DODECYL-BETA-D-MALTOSIDE
lig 52	BCL	B	102	66	BACTERIOCHLOROPHYLL A
lig 53	CRT	B	103	44	SPIRILLOXANTHIN
lig 54	PGV	D	501	39	OCTADEC-11-ENOATE
lig 55	CDL	D	502	58	CARDIOLIPIN
lig 56	BCL	D	503	66	BACTERIOCHLOROPHYLL A
lig 57	CA	D	504	1	CALCIUM ION
lig 58	LMT	E	101	35	DODECYL-BETA-D-MALTOSIDE
lig 59	BCL	E	102	66	BACTERIOCHLOROPHYLL A
lig 60	CRT	E	103	44	SPIRILLOXANTHIN
lig 61	PGV	F	501	36	OCTADEC-11-ENOATE
lig 62	BCL	F	502	66	BACTERIOCHLOROPHYLL A
lig 63	CA	F	503	1	CALCIUM ION
lig 64	LMT	G	101	35	DODECYL-BETA-D-MALTOSIDE
lig 65	BCL	G	102	66	BACTERIOCHLOROPHYLL A
lig 66	CRT	G	103	44	SPIRILLOXANTHIN
lig 67	LMT	G	104	35	DODECYL-BETA-D-MALTOSIDE
lig 68	BCL	I	101	66	BACTERIOCHLOROPHYLL A
lig 69	BCL	J	101	66	BACTERIOCHLOROPHYLL A
lig 70	LMT	J	102	35	DODECYL-BETA-D-MALTOSIDE
lig 71	CRT	K	101	44	SPIRILLOXANTHIN
lig 72	BCL	K	102	66	BACTERIOCHLOROPHYLL A
lig 73	BCL	N	101	66	BACTERIOCHLOROPHYLL A
lig 74	CRT	N	102	44	SPIRILLOXANTHIN
lig 75	LDA	O	501	16	LAURYL DIMETHYLAMINE-N-OXIDE
lig 76	BCL	O	502	66	BACTERIOCHLOROPHYLL A
lig 77	LMT	P	101	35	DODECYL-BETA-D-MALTOSIDE
lig 78	BCL	P	102	66	BACTERIOCHLOROPHYLL A
lig 79	LMT	P	103	35	DODECYL-BETA-D-MALTOSIDE
lig 80	CRT	Q	101	44	SPIRILLOXANTHIN
lig 81	BCL	Q	102	66	BACTERIOCHLOROPHYLL A
lig 82	BCL	R	101	66	BACTERIOCHLOROPHYLL A
lig 83	CRT	R	102	44	SPIRILLOXANTHIN
lig 84	LMT	R	103	35	DODECYL-BETA-D-MALTOSIDE
lig 85	BCL	S	101	66	BACTERIOCHLOROPHYLL A
lig 86	CA	S	102	1	CALCIUM ION
lig 87	BCL	T	101	66	BACTERIOCHLOROPHYLL A
lig 88	CRT	T	102	44	SPIRILLOXANTHIN
lig 89	BCL	U	101	66	BACTERIOCHLOROPHYLL A
lig 90	CA	U	102	1	CALCIUM ION
lig 91	LMT	V	101	35	DODECYL-BETA-D-MALTOSIDE
lig 92	BCL	V	102	66	BACTERIOCHLOROPHYLL A
lig 93	CRT	V	103	44	SPIRILLOXANTHIN
lig 94	BCL	W	101	66	BACTERIOCHLOROPHYLL A
lig 95	CA	W	102	1	CALCIUM ION
lig 96	LMT	X	101	35	DODECYL-BETA-D-MALTOSIDE
lig 97	BCL	X	102	66	BACTERIOCHLOROPHYLL A
lig 98	CRT	X	103	44	SPIRILLOXANTHIN
lig 99	BCL	Y	101	66	BACTERIOCHLOROPHYLL A
lig 100	CA	Y	102	1	CALCIUM ION
lig 101	LMT	Z	101	35	DODECYL-BETA-D-MALTOSIDE
lig 102	BCL	Z	102	66	BACTERIOCHLOROPHYLL A
lig 103	CRT	Z	103	44	SPIRILLOXANTHIN
lig 104	PGV	1	401	27	OCTADEC-11-ENOATE
lig 105	BCL	1	402	66	BACTERIOCHLOROPHYLL A
lig 106	LMT	2	101	35	DODECYL-BETA-D-MALTOSIDE
lig 107	BCL	2	102	66	BACTERIOCHLOROPHYLL A
lig 108	CRT	2	103	44	SPIRILLOXANTHIN
lig 109	LMT	2	104	35	DODECYL-BETA-D-MALTOSIDE
lig 110	BCL	3	101	66	BACTERIOCHLOROPHYLL A
lig 111	BCL	4	101	66	BACTERIOCHLOROPHYLL A
lig 112	CRT	4	102	44	SPIRILLOXANTHIN
lig 113	LMT	4	103	35	DODECYL-BETA-D-MALTOSIDE
lig 114	LMT	5	101	31	DODECYL-BETA-D-MALTOSIDE
lig 115	BCL	5	102	66	BACTERIOCHLOROPHYLL A
lig 116	BCL	6	101	66	BACTERIOCHLOROPHYLL A
lig 117	CRT	7	101	44	SPIRILLOXANTHIN
lig 118	BCL	7	102	61	BACTERIOCHLOROPHYLL A
lig 119	LMT	8	101	35	DODECYL-BETA-D-MALTOSIDE
lig 120	BCL	8	102	66	BACTERIOCHLOROPHYLL A
lig 121	CRT	8	103	44	SPIRILLOXANTHIN
lig 122	BCL	9	101	66	BACTERIOCHLOROPHYLL A
lig 123	LMT	0	101	35	DODECYL-BETA-D-MALTOSIDE
lig 124	BCL	0	102	66	BACTERIOCHLOROPHYLL A
lig 125	CRT	0	103	44	SPIRILLOXANTHIN

Analysis of Ligand-Protein Contacts in PDB entry: 8WDV

Analysis of Ligand-Protein Contacts in PDB entry:
8WDV