Analysis of Ligand-Protein Contacts in PDB entry:
8XGD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 72 ligands in PDB entry 8XGD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MC3
A
401 91,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 2
MC3
A
402 71,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 3
MC3
A
403 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 4
Y01
A
404 35CHOLESTEROL HEMISUCCINATE
lig 5
MC3
A
405 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 6
MC3
A
406 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 7
MC3
F
401 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 8
MC3
F
402 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 9
MC3
F
403 91,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 10
MC3
F
404 71,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 11
MC3
F
405 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 12
Y01
F
406 35CHOLESTEROL HEMISUCCINATE
lig 13
MC3
G
401 91,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 14
MC3
G
402 71,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 15
MC3
G
403 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 16
Y01
G
404 35CHOLESTEROL HEMISUCCINATE
lig 17
MC3
G
405 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 18
MC3
G
406 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 19
MC3
B
401 91,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 20
MC3
B
402 71,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 21
MC3
B
403 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 22
Y01
B
404 35CHOLESTEROL HEMISUCCINATE
lig 23
MC3
B
405 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 24
MC3
B
406 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 25
MC3
C
401 91,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 26
MC3
C
402 71,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 27
MC3
C
403 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 28
Y01
C
404 35CHOLESTEROL HEMISUCCINATE
lig 29
MC3
C
405 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 30
MC3
C
406 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 31
MC3
D
401 91,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 32
MC3
D
402 71,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 33
MC3
D
403 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 34
Y01
D
404 35CHOLESTEROL HEMISUCCINATE
lig 35
MC3
D
405 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 36
MC3
D
406 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 37
MC3
E
401 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 38
MC3
E
402 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 39
MC3
E
403 91,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 40
MC3
E
404 71,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 41
MC3
E
405 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 42
Y01
E
406 35CHOLESTEROL HEMISUCCINATE
lig 43
MC3
H
401 91,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 44
MC3
H
402 71,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 45
MC3
H
403 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 46
Y01
H
404 35CHOLESTEROL HEMISUCCINATE
lig 47
MC3
H
405 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 48
MC3
H
406 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 49
MC3
I
401 91,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 50
MC3
I
402 71,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 51
MC3
I
403 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 52
Y01
I
404 35CHOLESTEROL HEMISUCCINATE
lig 53
MC3
I
405 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 54
MC3
I
406 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 55
MC3
J
401 91,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 56
MC3
J
402 71,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 57
MC3
J
403 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 58
Y01
J
404 35CHOLESTEROL HEMISUCCINATE
lig 59
MC3
J
405 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 60
MC3
J
406 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 61
MC3
K
401 91,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 62
MC3
K
402 71,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 63
MC3
K
403 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 64
Y01
K
404 35CHOLESTEROL HEMISUCCINATE
lig 65
MC3
K
405 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 66
MC3
K
406 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 67
MC3
L
401 141,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 68
MC3
L
402 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 69
MC3
L
403 91,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 70
MC3
L
404 71,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 71
MC3
L
405 101,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLI
lig 72
Y01
L
406 35CHOLESTEROL HEMISUCCINATE