Analysis of Ligand-Protein Contacts in PDB entry:
8XP8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 8XP8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
5CM
B
4 205-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHAT
lig 2
DSN
D
1 6D-SERINE
lig 3
N2C
D
3 8N,S-DIMETHYLCYSTEINE
lig 4
MVA
D
4 8N-METHYLVALINE
lig 5
DSN
D
5 6D-SERINE
lig 6
NCY
D
7 7N-METHYLCYSTEINE
lig 7
MVA
D
8 8N-METHYLVALINE
lig 8
DSN
E
1 6D-SERINE
lig 9
N2C
E
3 8N,S-DIMETHYLCYSTEINE
lig 10
MVA
E
4 8N-METHYLVALINE
lig 11
DSN
E
5 6D-SERINE
lig 12
NCY
E
7 7N-METHYLCYSTEINE
lig 13
MVA
E
8 8N-METHYLVALINE
lig 14
MN
A
101 1MANGANESE (II) ION
lig 15
MN
A
102 1MANGANESE (II) ION
lig 16
MN
B
101 1MANGANESE (II) ION
lig 17
QUI
D
101 122-CARBOXYQUINOXALINE
lig 18
QUI
D
102 122-CARBOXYQUINOXALINE
lig 19
QUI
E
101 122-CARBOXYQUINOXALINE
lig 20
QUI
E
102 122-CARBOXYQUINOXALINE