Analysis of Ligand-Protein Contacts in PDB entry:
8Y6D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 8Y6D. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GLC
D
1 12ALPHA-D-GLUCOPYRANOSE
lig 2
GAL
D
2 11BETA-D-GALACTOPYRANOSE
lig 3
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 4
EDO
A
601 41,2-ETHANEDIOL
lig 5
EDO
A
602 41,2-ETHANEDIOL
lig 6
EDO
A
603 41,2-ETHANEDIOL
lig 7
EDO
A
604 41,2-ETHANEDIOL
lig 8
NO3
A
605 4NITRATE ION
lig 9
PEG
A
606 7DI(HYDROXYETHYL)ETHER
lig 10
EDO
A
607 41,2-ETHANEDIOL
lig 11
EDO
B
601 41,2-ETHANEDIOL
lig 12
EDO
B
602 41,2-ETHANEDIOL
lig 13
EDO
B
603 41,2-ETHANEDIOL
lig 14
EDO
B
604 41,2-ETHANEDIOL
lig 15
EDO
B
605 41,2-ETHANEDIOL