Analysis of Ligand-Protein Contacts in PDB entry:
8YAQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 8YAQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BGC
D
1 12BETA-D-GLUCOPYRANOSE
lig 2
BGC
D
2 11BETA-D-GLUCOPYRANOSE
lig 3
BGC
D
3 11BETA-D-GLUCOPYRANOSE
lig 4
BGC
D
4 11BETA-D-GLUCOPYRANOSE
lig 5
BGC
D
5 11BETA-D-GLUCOPYRANOSE
lig 6
BGC
C
1 12BETA-D-GLUCOPYRANOSE
lig 7
BGC
C
2 11BETA-D-GLUCOPYRANOSE
lig 8
BGC
C
3 11BETA-D-GLUCOPYRANOSE
lig 9
CL
A
1001 1CHLORIDE ION
lig 10
CL
A
1002 1CHLORIDE ION
lig 11
CL
B
1001 1CHLORIDE ION
lig 12
CL
B
1002 1CHLORIDE ION
lig 13
CL
B
1003 1CHLORIDE ION