Analysis of Ligand-Protein Contacts in PDB entry:
8YD0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 8YD0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
A
501 1MAGNESIUM ION
lig 2
ATP
A
502 31ADENOSINE-5'-TRIPHOSPHATE
lig 3
ATP
B
501 31ADENOSINE-5'-TRIPHOSPHATE
lig 4
ATP
D
501 31ADENOSINE-5'-TRIPHOSPHATE
lig 5
ATP
D
502 31ADENOSINE-5'-TRIPHOSPHATE
lig 6
ADP
E
501 27ADENOSINE-5'-DIPHOSPHATE
lig 7
MG
E
502 1MAGNESIUM ION
lig 8
ADP
F
501 27ADENOSINE-5'-DIPHOSPHATE
lig 9
BO2
H
301 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 10
BO2
I
301 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 11
BO2
K
301 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 12
BO2
L
301 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 13
BO2
M
301 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 14
BO2
N
301 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 15
BO2
O
201 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 16
BO2
P
201 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 17
BO2
Q
201 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 18
BO2
R
201 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 19
BO2
S
201 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 20
BO2
T
201 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 21
BO2
U
201 28 YLCARBONYL)-L-PHENYLALANINAMIDE
lig 22
BO2
V
301 28 YLCARBONYL)-L-PHENYLALANINAMIDE