Analysis of Ligand-Protein Contacts in PDB entry:
8YEC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 41 ligands in PDB entry 8YEC. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PSJ
E
301 12D-PSICOSE
lig 2
MG
E
303 1MAGNESIUM ION
lig 3
NA
E
304 1SODIUM ION
lig 4
PSJ
F
301 12D-PSICOSE
lig 5
MG
F
303 1MAGNESIUM ION
lig 6
PSJ
A
301 12D-PSICOSE
lig 7
MG
A
303 1MAGNESIUM ION
lig 8
NA
A
304 1SODIUM ION
lig 9
PSJ
B
301 12D-PSICOSE
lig 10
MG
B
303 1MAGNESIUM ION
lig 11
PSJ
C
301 12D-PSICOSE
lig 12
MG
C
303 1MAGNESIUM ION
lig 13
NA
C
304 1SODIUM ION
lig 14
PEG
C
305 7DI(HYDROXYETHYL)ETHER
lig 15
PSJ
D
301 12D-PSICOSE
lig 16
MG
D
303 1MAGNESIUM ION
lig 17
PSJ
G
301 12D-PSICOSE
lig 18
MG
G
303 1MAGNESIUM ION
lig 19
NA
G
304 1SODIUM ION
lig 20
PSJ
H
301 12D-PSICOSE
lig 21
MG
H
303 1MAGNESIUM ION
lig 22
PSJ
I
301 12D-PSICOSE
lig 23
MG
I
303 1MAGNESIUM ION
lig 24
NA
J
301 1SODIUM ION
lig 25
PSJ
J
302 12D-PSICOSE
lig 26
MG
J
304 1MAGNESIUM ION
lig 27
PSJ
K
301 12D-PSICOSE
lig 28
MG
K
303 1MAGNESIUM ION
lig 29
NA
K
304 1SODIUM ION
lig 30
PSJ
L
301 12D-PSICOSE
lig 31
MG
L
303 1MAGNESIUM ION
lig 32
PSJ
M
301 12D-PSICOSE
lig 33
MG
M
303 1MAGNESIUM ION
lig 34
NA
N
301 1SODIUM ION
lig 35
PSJ
N
302 12D-PSICOSE
lig 36
MG
N
304 1MAGNESIUM ION
lig 37
PSJ
O
301 12D-PSICOSE
lig 38
MG
O
303 1MAGNESIUM ION
lig 39
NA
O
304 1SODIUM ION
lig 40
PSJ
P
301 12D-PSICOSE
lig 41
MG
P
303 1MAGNESIUM ION