Analysis of Ligand-Protein Contacts in PDB entry:
8YES


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 8YES. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
B12
A
201 72COBALAMIN
lig 2
5AD
A
202 185'-DEOXYADENOSINE
lig 3
PO4
A
203 5PHOSPHATE ION
lig 4
PO4
A
204 5PHOSPHATE ION
lig 5
B12
B
201 72COBALAMIN
lig 6
5AD
B
202 185'-DEOXYADENOSINE
lig 7
B12
B
203 72COBALAMIN
lig 8
PO4
B
204 5PHOSPHATE ION
lig 9
PO4
B
205 5PHOSPHATE ION
lig 10
PO4
B
206 5PHOSPHATE ION
lig 11
5AD
C
201 185'-DEOXYADENOSINE
lig 12
PO4
C
202 5PHOSPHATE ION
lig 13
PO4
C
203 5PHOSPHATE ION
lig 14
PO4
C
204 5PHOSPHATE ION
lig 15
B12
D
201 72COBALAMIN
lig 16
5AD
D
202 185'-DEOXYADENOSINE
lig 17
PO4
D
203 5PHOSPHATE ION
lig 18
PO4
D
204 5PHOSPHATE ION
lig 19
PO4
D
205 5PHOSPHATE ION
lig 20
B12
E
201 72COBALAMIN
lig 21
5AD
E
202 185'-DEOXYADENOSINE
lig 22
PO4
E
203 5PHOSPHATE ION
lig 23
PO4
E
204 5PHOSPHATE ION
lig 24
B12
F
201 72COBALAMIN
lig 25
5AD
F
202 185'-DEOXYADENOSINE
lig 26
PO4
F
203 5PHOSPHATE ION