Analysis of Ligand-Protein Contacts in PDB entry:
8YGL

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 87 ligands in PDB entry 8YGL. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	BCL	0	101	61	BACTERIOCHLOROPHYLL A
lig 2	SPO	0	102	42	SPHEROIDENE
lig 3	SPO	0	103	42	SPHEROIDENE
lig 4	BCL	1	101	56	BACTERIOCHLOROPHYLL A
lig 5	SPO	1	102	42	SPHEROIDENE
lig 6	BCL	2	101	61	BACTERIOCHLOROPHYLL A
lig 7	SPO	2	102	42	SPHEROIDENE
lig 8	BCL	3	101	66	BACTERIOCHLOROPHYLL A
lig 9	SPO	3	102	42	SPHEROIDENE
lig 10	BCL	7	101	61	BACTERIOCHLOROPHYLL A
lig 11	BCL	8	101	66	BACTERIOCHLOROPHYLL A
lig 12	BCL	9	101	66	BACTERIOCHLOROPHYLL A
lig 13	SPO	9	102	42	SPHEROIDENE
lig 14	BCL	A	101	66	BACTERIOCHLOROPHYLL A
lig 15	PC1	A	102	45	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 16	PC1	A	103	32	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 17	PC1	A	104	32	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 18	BCL	B	101	66	BACTERIOCHLOROPHYLL A
lig 19	BCL	C	101	66	BACTERIOCHLOROPHYLL A
lig 20	SPO	C	102	42	SPHEROIDENE
lig 21	SPO	D	101	42	SPHEROIDENE
lig 22	BCL	D	102	66	BACTERIOCHLOROPHYLL A
lig 23	SPO	D	103	42	SPHEROIDENE
lig 24	PC1	D	104	37	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 25	BCL	E	101	66	BACTERIOCHLOROPHYLL A
lig 26	SPO	F	101	42	SPHEROIDENE
lig 27	BCL	F	102	66	BACTERIOCHLOROPHYLL A
lig 28	SPO	F	103	42	SPHEROIDENE
lig 29	BCL	G	101	66	BACTERIOCHLOROPHYLL A
lig 30	SPO	G	102	42	SPHEROIDENE
lig 31	CDL	H	301	78	CARDIOLIPIN
lig 32	BCL	I	101	66	BACTERIOCHLOROPHYLL A
lig 33	SPO	I	102	42	SPHEROIDENE
lig 34	BCL	J	101	66	BACTERIOCHLOROPHYLL A
lig 35	SPO	J	102	42	SPHEROIDENE
lig 36	SPO	J	103	42	SPHEROIDENE
lig 37	BCL	K	101	66	BACTERIOCHLOROPHYLL A
lig 38	BCL	L	301	66	BACTERIOCHLOROPHYLL A
lig 39	BCL	L	302	63	BACTERIOCHLOROPHYLL A
lig 40	BPH	L	303	62	BACTERIOPHEOPHYTIN A
lig 41	PC1	L	304	35	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 42	U10	L	305	43	UBIQUINONE-10
lig 43	PC1	L	306	36	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 44	U10	L	307	48	UBIQUINONE-10
lig 45	U10	L	308	19	UBIQUINONE-10
lig 46	U10	L	309	38	UBIQUINONE-10
lig 47	BPH	L	310	55	BACTERIOPHEOPHYTIN A
lig 48	PC1	L	311	32	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 49	PC1	M	401	40	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 50	PC1	M	402	47	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 51	U10	M	403	43	UBIQUINONE-10
lig 52	BCL	M	404	66	BACTERIOCHLOROPHYLL A
lig 53	BCL	M	405	66	BACTERIOCHLOROPHYLL A
lig 54	FE2	M	406	1	FE (II) ION
lig 55	U10	M	407	48	UBIQUINONE-10
lig 56	SPO	M	408	42	SPHEROIDENE
lig 57	CDL	M	409	100	CARDIOLIPIN
lig 58	CDL	M	410	78	CARDIOLIPIN
lig 59	PC1	M	411	45	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 60	SPO	N	101	42	SPHEROIDENE
lig 61	BCL	N	102	66	BACTERIOCHLOROPHYLL A
lig 62	BCL	O	101	66	BACTERIOCHLOROPHYLL A
lig 63	SPO	O	102	42	SPHEROIDENE
lig 64	PC1	O	103	32	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 65	SPO	O	104	42	SPHEROIDENE
lig 66	BCL	P	101	66	BACTERIOCHLOROPHYLL A
lig 67	SPO	P	102	42	SPHEROIDENE
lig 68	SPO	P	103	42	SPHEROIDENE
lig 69	BCL	Q	101	66	BACTERIOCHLOROPHYLL A
lig 70	BCL	R	101	66	BACTERIOCHLOROPHYLL A
lig 71	BCL	S	201	66	BACTERIOCHLOROPHYLL A
lig 72	SPO	S	202	42	SPHEROIDENE
lig 73	BCL	T	101	66	BACTERIOCHLOROPHYLL A
lig 74	SPO	T	102	42	SPHEROIDENE
lig 75	BCL	U	101	66	BACTERIOCHLOROPHYLL A
lig 76	SPO	U	102	42	SPHEROIDENE
lig 77	SPO	U	103	42	SPHEROIDENE
lig 78	SPO	V	101	42	SPHEROIDENE
lig 79	BCL	V	102	66	BACTERIOCHLOROPHYLL A
lig 80	BCL	W	101	66	BACTERIOCHLOROPHYLL A
lig 81	SPO	X	101	39	SPHEROIDENE
lig 82	U10	X	102	48	UBIQUINONE-10
lig 83	BCL	Z	101	66	BACTERIOCHLOROPHYLL A
lig 84	SPO	Z	102	42	SPHEROIDENE
lig 85	BCL	a	101	56	BACTERIOCHLOROPHYLL A
lig 86	SPO	b	101	42	SPHEROIDENE
lig 87	BCL	b	102	61	BACTERIOCHLOROPHYLL A

Analysis of Ligand-Protein Contacts in PDB entry: 8YGL

Analysis of Ligand-Protein Contacts in PDB entry:
8YGL