Analysis of Ligand-Protein Contacts in PDB entry:
8YKU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 8YKU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACT
A
401 4ACETATE ION
lig 2
CA
A
402 1CALCIUM ION
lig 3
CA
A
403 1CALCIUM ION
lig 4
CA
A
404 1CALCIUM ION
lig 5
CA
A
405 1CALCIUM ION
lig 6
CA
A
406 1CALCIUM ION
lig 7
CA
A
407 1CALCIUM ION
lig 8
CA
A
408 1CALCIUM ION
lig 9
CA
A
409 1CALCIUM ION
lig 10
TPS
A
410 22THIAMIN PHOSPHATE
lig 11
ANP
A
411 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 12
PG4
A
412 13TETRAETHYLENE GLYCOL
lig 13
PEG
A
413 7DI(HYDROXYETHYL)ETHER
lig 14
EDO
A
414 41,2-ETHANEDIOL
lig 15
ACT
A
415 4ACETATE ION
lig 16
PG4
A
416 13TETRAETHYLENE GLYCOL
lig 17
EDO
A
417 41,2-ETHANEDIOL