Analysis of Ligand-Protein Contacts in PDB entry:
8YPB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 56 ligands in PDB entry 8YPB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BCL
b
101 66BACTERIOCHLOROPHYLL A
lig 2
BCL
F
101 66BACTERIOCHLOROPHYLL A
lig 3
CA
F
102 1CALCIUM ION
lig 4
BCL
A
101 66BACTERIOCHLOROPHYLL A
lig 5
BCL
B
101 66BACTERIOCHLOROPHYLL A
lig 6
CA
B
102 1CALCIUM ION
lig 7
BCL
C
101 66BACTERIOCHLOROPHYLL A
lig 8
CRT
C
102 44SPIRILLOXANTHIN
lig 9
BCL
D
101 66BACTERIOCHLOROPHYLL A
lig 10
CA
D
102 1CALCIUM ION
lig 11
BCL
E
101 66BACTERIOCHLOROPHYLL A
lig 12
CRT
E
102 44SPIRILLOXANTHIN
lig 13
BCL
G
101 66BACTERIOCHLOROPHYLL A
lig 14
CA
G
102 1CALCIUM ION
lig 15
CRT
G
103 44SPIRILLOXANTHIN
lig 16
BCL
H
101 66BACTERIOCHLOROPHYLL A
lig 17
BCL
I
101 66BACTERIOCHLOROPHYLL A
lig 18
CA
I
102 1CALCIUM ION
lig 19
BCL
J
101 66BACTERIOCHLOROPHYLL A
lig 20
CRT
J
102 44SPIRILLOXANTHIN
lig 21
BCL
K
101 66BACTERIOCHLOROPHYLL A
lig 22
CA
K
102 1CALCIUM ION
lig 23
BCL
L
101 66BACTERIOCHLOROPHYLL A
lig 24
CRT
L
102 44SPIRILLOXANTHIN
lig 25
CRT
M
101 44SPIRILLOXANTHIN
lig 26
BCL
M
102 66BACTERIOCHLOROPHYLL A
lig 27
CA
M
103 1CALCIUM ION
lig 28
BCL
N
101 66BACTERIOCHLOROPHYLL A
lig 29
CRT
N
102 44SPIRILLOXANTHIN
lig 30
BCL
O
101 66BACTERIOCHLOROPHYLL A
lig 31
CA
O
102 1CALCIUM ION
lig 32
BCL
P
101 66BACTERIOCHLOROPHYLL A
lig 33
CRT
P
102 44SPIRILLOXANTHIN
lig 34
BCL
Q
101 66BACTERIOCHLOROPHYLL A
lig 35
CA
Q
102 1CALCIUM ION
lig 36
CRT
Q
103 44SPIRILLOXANTHIN
lig 37
BCL
R
101 66BACTERIOCHLOROPHYLL A
lig 38
BCL
S
101 66BACTERIOCHLOROPHYLL A
lig 39
CA
S
102 1CALCIUM ION
lig 40
CRT
S
103 44SPIRILLOXANTHIN
lig 41
BCL
T
101 66BACTERIOCHLOROPHYLL A
lig 42
BCL
U
101 66BACTERIOCHLOROPHYLL A
lig 43
CA
U
102 1CALCIUM ION
lig 44
BCL
V
101 66BACTERIOCHLOROPHYLL A
lig 45
CRT
V
102 44SPIRILLOXANTHIN
lig 46
BCL
W
101 66BACTERIOCHLOROPHYLL A
lig 47
CA
W
102 1CALCIUM ION
lig 48
CRT
W
103 44SPIRILLOXANTHIN
lig 49
BCL
X
101 66BACTERIOCHLOROPHYLL A
lig 50
BCL
Y
101 66BACTERIOCHLOROPHYLL A
lig 51
CA
Y
102 1CALCIUM ION
lig 52
BCL
Z
101 66BACTERIOCHLOROPHYLL A
lig 53
CRT
Z
102 44SPIRILLOXANTHIN
lig 54
CRT
a
101 44SPIRILLOXANTHIN
lig 55
BCL
a
102 66BACTERIOCHLOROPHYLL A
lig 56
CA
a
103 1CALCIUM ION