Analysis of Ligand-Protein Contacts in PDB entry:
8YPD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 42 ligands in PDB entry 8YPD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BCL
b
101 66BACTERIOCHLOROPHYLL A
lig 2
BCL
F
101 66BACTERIOCHLOROPHYLL A
lig 3
BCL
A
101 66BACTERIOCHLOROPHYLL A
lig 4
CRT
A
102 44SPIRILLOXANTHIN
lig 5
BCL
B
101 66BACTERIOCHLOROPHYLL A
lig 6
CRT
B
102 44SPIRILLOXANTHIN
lig 7
BCL
C
101 66BACTERIOCHLOROPHYLL A
lig 8
BCL
D
101 66BACTERIOCHLOROPHYLL A
lig 9
CRT
D
102 44SPIRILLOXANTHIN
lig 10
BCL
E
101 66BACTERIOCHLOROPHYLL A
lig 11
BCL
G
101 66BACTERIOCHLOROPHYLL A
lig 12
CRT
G
102 44SPIRILLOXANTHIN
lig 13
BCL
H
101 66BACTERIOCHLOROPHYLL A
lig 14
BCL
I
101 66BACTERIOCHLOROPHYLL A
lig 15
CRT
I
102 44SPIRILLOXANTHIN
lig 16
BCL
J
101 66BACTERIOCHLOROPHYLL A
lig 17
BCL
K
101 66BACTERIOCHLOROPHYLL A
lig 18
CRT
K
102 44SPIRILLOXANTHIN
lig 19
BCL
L
101 66BACTERIOCHLOROPHYLL A
lig 20
BCL
M
101 66BACTERIOCHLOROPHYLL A
lig 21
CRT
M
102 44SPIRILLOXANTHIN
lig 22
BCL
N
101 66BACTERIOCHLOROPHYLL A
lig 23
BCL
O
101 66BACTERIOCHLOROPHYLL A
lig 24
CRT
O
102 44SPIRILLOXANTHIN
lig 25
BCL
P
101 66BACTERIOCHLOROPHYLL A
lig 26
BCL
Q
101 66BACTERIOCHLOROPHYLL A
lig 27
CRT
Q
102 44SPIRILLOXANTHIN
lig 28
BCL
R
101 66BACTERIOCHLOROPHYLL A
lig 29
BCL
S
101 66BACTERIOCHLOROPHYLL A
lig 30
CRT
S
102 44SPIRILLOXANTHIN
lig 31
BCL
T
101 66BACTERIOCHLOROPHYLL A
lig 32
BCL
U
101 66BACTERIOCHLOROPHYLL A
lig 33
CRT
U
102 44SPIRILLOXANTHIN
lig 34
BCL
V
101 66BACTERIOCHLOROPHYLL A
lig 35
BCL
W
101 66BACTERIOCHLOROPHYLL A
lig 36
CRT
W
102 44SPIRILLOXANTHIN
lig 37
BCL
X
101 66BACTERIOCHLOROPHYLL A
lig 38
BCL
Y
101 66BACTERIOCHLOROPHYLL A
lig 39
CRT
Y
102 44SPIRILLOXANTHIN
lig 40
BCL
Z
101 66BACTERIOCHLOROPHYLL A
lig 41
CRT
a
101 44SPIRILLOXANTHIN
lig 42
BCL
a
102 66BACTERIOCHLOROPHYLL A