Analysis of Ligand-Protein Contacts in PDB entry:
8YPY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 8YPY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
APC
A
1001 31DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ES
lig 2
HSX
A
1002 145-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 3
CD
A
1003 1CADMIUM ION
lig 4
APC
A
1004 31DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ES
lig 5
PO4
A
1005 5PHOSPHATE ION
lig 6
PO4
A
1006 5PHOSPHATE ION
lig 7
PO4
A
1007 5PHOSPHATE ION
lig 8
HSX
B
2001 145-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 9
CD
B
2002 1CADMIUM ION
lig 10
APC
C
1001 31DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ES
lig 11
APC
C
1002 31DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ES
lig 12
HSX
C
1003 145-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 13
CD
C
1004 1CADMIUM ION
lig 14
APC
D
1001 31DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ES
lig 15
HSX
D
1002 145-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 16
CD
D
1003 1CADMIUM ION
lig 17
PO4
D
1004 5PHOSPHATE ION
lig 18
APC
E
1001 31DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ES
lig 19
HSX
E
1002 145-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 20
CD
E
1003 1CADMIUM ION
lig 21
HSX
F
2001 145-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 22
CD
F
2002 1CADMIUM ION
lig 23
PO4
F
2003 5PHOSPHATE ION