Analysis of Ligand-Protein Contacts in PDB entry:
8YS7


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 8YS7. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DSN
E
1 6D-SERINE
lig 2
N2C
E
3 8N,S-DIMETHYLCYSTEINE
lig 3
MVA
E
4 8N-METHYLVALINE
lig 4
DSN
E
5 6D-SERINE
lig 5
NCY
E
7 7N-METHYLCYSTEINE
lig 6
MVA
E
8 8N-METHYLVALINE
lig 7
DVA
I
2 7D-VALINE
lig 8
SAR
I
4 5SARCOSINE
lig 9
MVA
I
5 8N-METHYLVALINE
lig 10
PXZ
I
6 22 PHENOXAZIN-3-ONE
lig 11
DVA
I
8 7D-VALINE
lig 12
SAR
I
10 5SARCOSINE
lig 13
MVA
I
11 8N-METHYLVALINE
lig 14
DVA
D
2 7D-VALINE
lig 15
SAR
D
4 5SARCOSINE
lig 16
MVA
D
5 8N-METHYLVALINE
lig 17
PXZ
D
6 22 PHENOXAZIN-3-ONE
lig 18
DVA
D
8 7D-VALINE
lig 19
SAR
D
10 5SARCOSINE
lig 20
MVA
D
11 8N-METHYLVALINE
lig 21
DSN
A
1 6D-SERINE
lig 22
N2C
A
3 8N,S-DIMETHYLCYSTEINE
lig 23
MVA
A
4 8N-METHYLVALINE
lig 24
DSN
A
5 6D-SERINE
lig 25
NCY
A
7 7N-METHYLCYSTEINE
lig 26
MVA
A
8 8N-METHYLVALINE
lig 27
QUI
E
101 122-CARBOXYQUINOXALINE
lig 28
QUI
E
102 122-CARBOXYQUINOXALINE
lig 29
QUI
A
101 122-CARBOXYQUINOXALINE
lig 30
QUI
A
102 122-CARBOXYQUINOXALINE