Analysis of Ligand-Protein Contacts in PDB entry:
8YVL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 8YVL. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
A
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
CA
A
504 1CALCIUM ION
lig 5
CA
A
505 1CALCIUM ION
lig 6
CA
A
506 1CALCIUM ION
lig 7
NAG
B
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
B
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
B
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
CA
B
504 1CALCIUM ION
lig 11
CA
B
505 1CALCIUM ION
lig 12
NAG
C
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
C
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
C
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
CA
C
504 1CALCIUM ION
lig 16
CA
C
505 1CALCIUM ION
lig 17
NAG
D
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
D
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
D
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
CA
D
504 1CALCIUM ION
lig 21
CA
D
505 1CALCIUM ION